Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AL359643.1-201ENST00000404109 423 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 SETP15-201ENST00000412724 337 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 TNPO1P1-201ENST00000423641 1138 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 TPTE2P1-204ENST00000435256 593 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 RPS29P10-201ENST00000439197 166 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC073358.1-201ENST00000505671 684 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 RNA5SP249-201ENST00000516127 99 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC022616.2-201ENST00000523185 300 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 TRIM77BP-201ENST00000524985 1119 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 GTF2IP11-201ENST00000526931 420 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 MIR6780B-201ENST00000610307 79 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC015871.5-202ENST00000623252 701 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AP001962.1-201ENST00000624114 559 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 AC074101.1-201ENST00000637861 241 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
UPF2Q9HAU5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 MIR133B-201ENST00000362210 119 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 RN7SKP125-201ENST00000410481 302 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 OR6C71P-201ENST00000432580 913 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AL136455.1-201ENST00000441083 1240 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC019084.1-201ENST00000457337 432 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AP002884.1-201ENST00000479691 655 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC012400.1-201ENST00000518452 381 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC007066.2-202ENST00000566531 914 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC079315.1-201ENST00000602952 623 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC002044.3-201ENST00000623314 541 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 AC025262.3-201ENST00000623666 360 ntBASIC6.27□□□□□ -1.41
UPF2Q9HAU5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF2Q9HAU5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 AC092747.4-201ENST00000620519 1861 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 RNA5SP319-201ENST00000362768 119 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 RN7SKP187-201ENST00000365536 330 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 AC005522.1-201ENST00000395416 346 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 EEF1B2P8-201ENST00000414101 671 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 OR6E1P-201ENST00000414424 923 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 AC093155.2-201ENST00000420734 937 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 AL356981.1-201ENST00000454879 684 ntBASIC6.26□□□□□ -1.41
UPF2Q9HAU5 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.26□□□□□ -1.41
UPF2Q9HAU5 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms