Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 BX276092.8-201ENST00000455722 250 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC020779.1-201ENST00000478757 796 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 RPS24P16-201ENST00000497294 392 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC022360.1-201ENST00000521058 340 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AP000619.2-201ENST00000546014 969 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 MIR7853-201ENST00000584820 132 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AP005432.2-201ENST00000608162 586 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC116651.1-201ENST00000609724 556 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AL356608.1-201ENST00000610034 820 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AL049539.1-201ENST00000611964 459 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 CASC19-260ENST00000641828 2001 ntBASIC5.6□□□□□ -1.51
NXF3Q9H4D5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NXF3Q9H4D5 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 RNU1-74P-201ENST00000384108 171 ntBASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AL161722.2-201ENST00000434731 981 ntBASIC5.59□□□□□ -1.51
NXF3Q9H4D5 MED28P3-201ENST00000444288 531 ntBASIC5.59□□□□□ -1.51
NXF3Q9H4D5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 RN7SKP260-201ENST00000516907 149 ntBASIC5.59□□□□□ -1.51
NXF3Q9H4D5 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AP001784.1-201ENST00000624107 428 ntBASIC5.59□□□□□ -1.51
NXF3Q9H4D5 AL353662.3-201ENST00000625131 237 ntBASIC5.59□□□□□ -1.51
NXF3Q9H4D5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NXF3Q9H4D5 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NXF3Q9H4D5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NXF3Q9H4D5 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
NXF3Q9H4D5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NXF3Q9H4D5 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC092451.3-201ENST00000625067 1343 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AL078599.1-201ENST00000402075 293 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 RPL5P2-201ENST00000429598 854 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 KNOP1P3-201ENST00000446933 426 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC090804.1-201ENST00000448870 490 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC012123.2-201ENST00000485809 248 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC097173.1-201ENST00000505862 819 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 LDHBP3-201ENST00000514909 822 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 MIR4700-201ENST00000578311 74 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 EIF3FP1-201ENST00000613970 806 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 INTS6P1-201ENST00000504674 2530 ntBASIC5.58□□□□□ -1.52
NXF3Q9H4D5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NXF3Q9H4D5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms