Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 KARSP1-201ENST00000451871 1752 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC114774.1-201ENST00000507410 1770 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 ADAM24P-201ENST00000398655 2101 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 RNU6-236P-201ENST00000363886 106 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 OR13C3-201ENST00000374781 1108 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 YWHAZP4-201ENST00000392459 708 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 MTND4P3-201ENST00000417829 541 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 HMGB1P49-201ENST00000418882 569 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC005189.1-201ENST00000431286 310 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 POU5F1P5-201ENST00000445059 658 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 HIGD1AP16-201ENST00000450986 258 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC010468.1-201ENST00000461022 817 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 RPL5P13-201ENST00000462840 709 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 CCDC11P1-201ENST00000503137 1162 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC112484.3-201ENST00000505910 329 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC010486.3-201ENST00000511602 785 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 ICE2P1-201ENST00000512800 1849 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 OR8I1P-201ENST00000529291 931 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AP004609.2-201ENST00000532177 190 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 RN7SL622P-201ENST00000585292 275 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC012254.4-201ENST00000588843 273 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AL512506.2-201ENST00000624472 458 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AL121594.5-201ENST00000631724 573 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 CASC19-246ENST00000641625 1606 ntBASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.61□□□□□ -1.51
AMBRA1Q9C0C7 AC022325.1-201ENST00000502748 2199 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms