Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Z84478.1-201ENST00000438230 1219 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 DNAJB5P1-201ENST00000454004 806 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 AC245028.2-201ENST00000458673 253 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 OR51K1P-201ENST00000510214 950 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 GAPDHP62-201ENST00000515313 990 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 RN7SKP66-201ENST00000516681 231 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 CDC42P3-201ENST00000518493 633 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 AL356801.1-201ENST00000559320 294 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 AL512329.2-201ENST00000607350 548 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 CASC19-264ENST00000641912 1184 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 MUC2-202ENST00000613187 4845 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM4Q9C037 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM4Q9C037 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 AC006206.1-201ENST00000544842 3387 ntBASIC5.46□□□□□ -1.54
TRIM4Q9C037 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC131971.1-201ENST00000332881 1482 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC104964.3-201ENST00000606115 2860 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL391422.1-201ENST00000402155 436 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC016739.1-201ENST00000405359 345 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 RN7SKP213-201ENST00000410746 298 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 BMS1P17-202ENST00000416720 316 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 CNOT7P2-201ENST00000441051 832 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL589765.3-201ENST00000446084 462 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 OR52E3P-201ENST00000452083 936 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 LRRC37A14P-201ENST00000452297 462 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 RN7SL172P-201ENST00000460535 303 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 RPL35AP19-201ENST00000469425 329 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC006463.2-201ENST00000473326 348 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 RPL21P6-201ENST00000479171 504 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 NENFP3-201ENST00000503735 313 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC105384.2-201ENST00000508433 640 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 MIR4697-201ENST00000582977 78 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 HIRAP1-201ENST00000605318 787 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL451049.1-201ENST00000608672 497 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL049539.1-201ENST00000611964 459 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL121612.2-201ENST00000612261 482 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL359513.1-201ENST00000614364 557 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC008115.3-201ENST00000614874 549 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC068870.2-201ENST00000620635 389 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM4Q9C037 YES1P1-201ENST00000418510 1628 ntBASIC5.45□□□□□ -1.54
TRIM4Q9C037 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM4Q9C037 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC023421.1-201ENST00000590535 1785 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 PDZK1P1-202ENST00000425209 1350 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM4Q9C037 UBBP2-201ENST00000376781 231 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM4Q9C037 RN7SKP29-201ENST00000410957 272 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 RN7SKP273-201ENST00000411392 314 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 RAB28P1-201ENST00000411517 641 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 AL596448.1-201ENST00000415024 392 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AZGP1P2-201ENST00000454506 345 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms