Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 SDR42E1P1-201ENST00000611327 477 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC004477.3-201ENST00000614061 590 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 BCORP1-203ENST00000513194 5093 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 RN7SKP160-201ENST00000363804 340 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 RNA5SP132-201ENST00000364725 118 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 MIR105-1-201ENST00000385222 81 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 RNU1-149P-201ENST00000390870 161 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 MIR937-201ENST00000401271 86 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AL035079.1-201ENST00000405210 287 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AL390316.1-201ENST00000406279 553 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AL513325.1-201ENST00000417716 1034 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AL139148.1-201ENST00000427122 680 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AC069307.1-201ENST00000602820 447 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AL589674.2-201ENST00000604304 337 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 BNIP3P35-201ENST00000604530 490 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AC211433.2-201ENST00000608433 387 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AC005840.5-201ENST00000619166 599 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 BX005214.3-202ENST00000619809 325 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 AL691477.1-201ENST00000624398 162 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 TET1P1-201ENST00000426627 2301 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 PANDAR-201ENST00000629595 1506 ntBASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
RSPO3Q9BXY4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 NUDT19P3-201ENST00000404698 555 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 GNG5P5-201ENST00000420444 220 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC104333.2-201ENST00000422630 192 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 GAPDHP58-201ENST00000438477 1006 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC011225.1-201ENST00000457751 369 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC110749.1-201ENST00000462007 357 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC010503.3-201ENST00000594355 540 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC090527.3-201ENST00000619041 548 ntBASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms