Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 MAPK10-260ENST00000641047 2546 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.311-201ENST00000365068 96 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 RNU6-639P-201ENST00000384074 107 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 RNA5SP118-201ENST00000410385 109 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AL356968.2-201ENST00000412769 1257 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC113618.1-201ENST00000416747 285 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AL355433.1-201ENST00000422804 300 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 CD302-202ENST00000429078 3803 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 RPL7P56-201ENST00000429441 717 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 snoU109.1-201ENST00000459339 135 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 RN7SL751P-201ENST00000473281 284 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC025458.1-201ENST00000506046 166 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC011352.2-201ENST00000514574 1016 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 RNA5SP318-201ENST00000516352 92 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 OR5M7P-201ENST00000526140 972 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC008147.3-201ENST00000548666 354 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC079905.1-201ENST00000549280 475 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AP001542.2-201ENST00000593141 364 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC008638.3-201ENST00000603341 463 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC091488.1-201ENST00000604239 660 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC010200.2-201ENST00000605098 235 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AL589743.6-201ENST00000611025 117 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AP005212.3-201ENST00000619964 528 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 RMST_7.1-201ENST00000621935 268 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 FAM205BP-202ENST00000399773 4009 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC007342.5-201ENST00000571340 2142 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC006116.1-201ENST00000587908 2171 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 AC110769.2-201ENST00000602760 1548 ntBASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.22□□□□□ -1.25
COL25A1Q9BXS0 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC7.21□□□□□ -1.25
COL25A1Q9BXS0 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms