Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 OR8V1P-201ENST00000395193 873 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC007738.1-201ENST00000413892 348 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC013268.2-201ENST00000420753 337 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC009238.2-201ENST00000431026 355 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 RPL12P18-201ENST00000437175 325 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC073109.1-201ENST00000445066 978 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AL161722.1-201ENST00000446972 1032 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC073909.1-201ENST00000447112 999 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC091180.1-201ENST00000462104 372 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC007998.1-201ENST00000474156 672 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC105031.1-201ENST00000518550 476 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC022826.1-201ENST00000519383 805 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 MIR4472-2-201ENST00000582069 67 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC087468.1-201ENST00000604365 630 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC018695.5-201ENST00000605872 315 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 Z95327.3-201ENST00000610385 572 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 CYP4F35P-202ENST00000636121 390 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC083843.2-201ENST00000568248 6253 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 ICE2P1-201ENST00000512800 1849 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 CDY11P-201ENST00000447168 1651 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC107977.1-201ENST00000355745 939 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 U3.3-201ENST00000362986 216 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 RNU1-149P-201ENST00000390870 161 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AL139148.1-201ENST00000427122 680 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 RPL35AP21-201ENST00000437667 333 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 RPS29P10-201ENST00000439197 166 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 MRPL35P2-201ENST00000448009 511 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 BTF3P6-201ENST00000448054 499 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC100832.1-201ENST00000471945 383 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC008676.3-201ENST00000521237 435 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC005726.4-201ENST00000582858 458 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC006363.1-201ENST00000603806 463 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 FO393422.1-201ENST00000603908 708 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC010245.2-201ENST00000606908 1167 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 OR55B1P-203ENST00000641518 2602 ntBASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HDHD3Q9BSH5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms