Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU6-225P-201ENST00000384613 103 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SSX3Q99909 AL096711.1-201ENST00000404780 554 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 MIR1203-201ENST00000408812 85 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 GABARAPL3-201ENST00000412799 354 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX3Q99909 RPL35AP3-201ENST00000414680 288 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX3Q99909 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX3Q99909 AC099336.2-201ENST00000422457 254 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX3Q99909 AC007563.3-201ENST00000433233 371 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX3Q99909 TMX2P1-201ENST00000436507 708 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 TCEA1P3-201ENST00000443005 880 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 BMS1P10-201ENST00000443754 1120 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AL353898.1-201ENST00000444055 238 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 MED28P3-201ENST00000444288 531 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX3Q99909 AP006222.1-205ENST00000450734 457 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 CBX1P2-201ENST00000453841 458 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 GEMIN2P1-201ENST00000454246 752 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AC099560.2-201ENST00000457554 255 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AC104164.1-201ENST00000460282 590 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AC011476.1-201ENST00000466725 307 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 CCDC75P1-201ENST00000469247 791 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 RPL21P6-201ENST00000479171 504 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 CCDC11P1-201ENST00000503137 1162 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 CDH12P2-201ENST00000504393 298 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.81□□□□□ -1.64
SSX3Q99909 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSX3Q99909 AC244502.2-201ENST00000543361 851 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX3Q99909 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX3Q99909 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX3Q99909 MIR3936-201ENST00000584304 110 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 FAM27E4-201ENST00000605259 342 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AC015802.5-201ENST00000607478 399 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AP005131.7-201ENST00000610087 611 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 RPL23AP61-201ENST00000623642 466 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 AC008691.1-209ENST00000642094 814 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX3Q99909 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 CASC19-221ENST00000641309 1382 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 AP000756.2-201ENST00000624168 2567 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSX3Q99909 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 FBXL21-201ENST00000297158 1305 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSX3Q99909 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 OR52B3P-201ENST00000314715 928 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 RN7SKP269-201ENST00000365545 319 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC016739.1-201ENST00000405359 345 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AL512430.2-201ENST00000406786 339 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 BTF3P9-201ENST00000418784 283 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC138761.5-201ENST00000433967 325 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 PCBP2P1-201ENST00000437262 977 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC073109.1-201ENST00000445066 978 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 RPL31P15-201ENST00000449770 338 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 TAAR4P-201ENST00000454843 1039 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX3Q99909 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 TPT1P1-201ENST00000458495 518 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 RN7SL57P-201ENST00000493687 290 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC104109.1-201ENST00000498563 436 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC021146.7-201ENST00000509604 775 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC108157.1-201ENST00000510511 539 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 SNORD46.2-201ENST00000516021 102 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 420.6 ms