Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 CYCSP42-201ENST00000450823 238 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 HIGD1AP16-201ENST00000450986 258 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 VN1R40P-201ENST00000455196 941 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AP000563.1-201ENST00000490865 758 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC090958.1-201ENST00000511122 351 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 GAPDHP71-201ENST00000511530 1003 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 TPM3P3-201ENST00000521343 354 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC244502.2-201ENST00000543361 851 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC009097.3-201ENST00000563557 1018 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 MIR4502-201ENST00000580432 81 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC134669.1-201ENST00000581275 672 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 MIR132-201ENST00000591554 101 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC141002.1-201ENST00000607025 279 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 uc_338.31-201ENST00000615595 186 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC092111.2-201ENST00000611627 1414 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 SNORD56.4-201ENST00000363883 71 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 MIR513B-201ENST00000385136 84 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX18Q96RF0 YWHAZP6-201ENST00000399764 738 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AL139805.1-201ENST00000407837 289 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 RNA5SP431-201ENST00000410312 120 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 RPL22P18-201ENST00000417197 377 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 KRR1P1-201ENST00000419430 803 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC010099.3-201ENST00000423896 409 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 PNRC2P1-201ENST00000423940 420 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 OSTCP4-201ENST00000424397 449 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC115283.1-201ENST00000427353 400 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC108479.1-201ENST00000431142 427 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC094019.1-201ENST00000434678 472 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 OR3D1P-201ENST00000438288 955 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 CR769776.1-201ENST00000441254 787 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 RPS10P18-201ENST00000442662 495 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AL358876.1-201ENST00000453364 1075 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AP002884.1-201ENST00000479691 655 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 EIF3LP3-201ENST00000495197 822 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 PSMA2P2-201ENST00000504319 686 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC117522.2-201ENST00000510049 657 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC147055.3-201ENST00000510547 851 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 MTCO3P28-201ENST00000513351 515 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX18Q96RF0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 NPIPB14P-203ENST00000532298 987 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC092865.1-201ENST00000544395 1023 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AL356801.1-201ENST00000559320 294 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC026826.3-201ENST00000561747 158 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms