Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AL034417.1-201ENST00000399343 800 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 LAP3P1-201ENST00000403648 294 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 RN7SKP86-201ENST00000410454 332 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 GAPDHP58-201ENST00000438477 1006 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 ACA64.1-201ENST00000459171 127 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 NACAP5-201ENST00000509863 636 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 MRPS5P3-201ENST00000515577 166 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 RNA5SP340-201ENST00000517132 107 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 IGBP1P1-201ENST00000554337 1009 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 MIR3154-201ENST00000577829 84 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC011500.1-201ENST00000601963 469 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AL137072.1-201ENST00000603444 466 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC124916.2-201ENST00000604416 224 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 PPATP2-201ENST00000605635 508 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 MIR8069-1-201ENST00000616627 86 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC131238.1-201ENST00000617135 328 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 LINC00901.1-201ENST00000617252 152 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC015914.2-201ENST00000618167 288 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 MIR6839-201ENST00000620425 113 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 MIR8069-2-201ENST00000621412 86 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC129778.1-202ENST00000623812 261 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AL591379.1-207ENST00000635982 261 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 CASC19-274ENST00000642018 970 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC092111.2-201ENST00000611627 1414 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 AC104118.1-201ENST00000607625 1589 ntBASIC3.92□□□□□ -1.78
AP1S3Q96PC3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP1S3Q96PC3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 TMSB4XP2-201ENST00000335179 210 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 RNA5SP223-201ENST00000365174 120 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 GAPDHP15-201ENST00000398586 975 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 DBIP1-201ENST00000401435 260 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC013470.3-201ENST00000420252 1194 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC046176.1-201ENST00000435260 1170 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC013410.1-201ENST00000436223 1232 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 FGF7P3-201ENST00000454645 303 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC092754.1-201ENST00000472975 479 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC008410.1-201ENST00000483777 339 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC091874.2-201ENST00000505889 720 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 LDHAP1-201ENST00000509421 992 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 HMGB3P13-201ENST00000511263 607 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC130364.2-201ENST00000528639 604 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AP003033.2-201ENST00000528901 805 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC027369.5-201ENST00000533838 755 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms