Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC005294.1-201ENST00000355509 281 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 SNORA16A-201ENST00000384342 137 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 RPL10P10-201ENST00000403509 664 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 MARK2P12-201ENST00000420129 585 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 SRSF1P1-201ENST00000424058 520 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 PRUNEP1-201ENST00000425846 705 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 NANOGP4-201ENST00000427230 913 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 GSTM5P1-201ENST00000434751 660 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC012075.1-201ENST00000436549 580 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 RPL12P11-201ENST00000439970 501 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 NOP56P2-201ENST00000447491 769 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC100832.1-201ENST00000471945 383 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC117394.1-201ENST00000477323 567 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 RN7SL717P-201ENST00000478343 297 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 EIF1P7-201ENST00000487533 337 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC127381.1-201ENST00000555979 939 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC011840.5-201ENST00000582125 771 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC060766.1-201ENST00000590824 627 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC011626.1-201ENST00000604710 562 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AC010245.2-201ENST00000606908 1167 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AL731566.1-201ENST00000620490 1937 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AL672167.1-204ENST00000641875 3017 ntBASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 KARSP1-201ENST00000451871 1752 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC006210.2-201ENST00000367074 1545 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AP000542.2-201ENST00000623199 6179 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 GABARAPL3-201ENST00000412799 354 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 NAP1L4P2-201ENST00000425958 899 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 GAPDHP34-201ENST00000432112 823 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 SEPT7P3-201ENST00000455017 621 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 RANP1-206ENST00000455094 651 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 SETP20-201ENST00000457046 852 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC079168.1-201ENST00000458741 345 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 RPSAP39-201ENST00000467439 883 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 RPL35AP19-201ENST00000469425 329 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 BLZF2P-201ENST00000553776 1130 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC020978.7-201ENST00000575953 1187 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC009597.2-201ENST00000604659 592 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC000068.2-201ENST00000608816 460 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 BNIP3P41-202ENST00000616656 861 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC037198.3-201ENST00000616754 526 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 MIR8080-201ENST00000622224 89 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AC104260.2-201ENST00000623551 3497 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 CDY11P-201ENST00000447168 1651 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 AL022393.1-201ENST00000625142 1677 ntBASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RTN4IP1Q8WWV3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RTN4IP1Q8WWV3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTN4IP1Q8WWV3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTN4IP1Q8WWV3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RTN4IP1Q8WWV3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms