Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 SNORA77-201ENST00000408716 125 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 CNOT7P1-201ENST00000429006 852 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 AL137845.2-201ENST00000444292 988 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 NUTF2P7-201ENST00000453086 375 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 AC093827.1-201ENST00000480094 861 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 AP002981.1-201ENST00000517692 975 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.23□□□□□ -1.41
SNED1Q8TER0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.23□□□□□ -1.41
SNED1Q8TER0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.23□□□□□ -1.41
SNED1Q8TER0 AC005377.1-201ENST00000605126 456 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
SNED1Q8TER0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC010928.1-201ENST00000592477 1447 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 MIR589-201ENST00000385238 99 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 RPS3AP23-201ENST00000401762 784 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 RN7SKP17-201ENST00000411242 351 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 GTF2IP5-201ENST00000414608 731 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 CHIAP3-201ENST00000423668 1133 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC068287.1-201ENST00000430283 295 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 AURKAPS2-201ENST00000454983 333 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 AL161747.1-201ENST00000480068 358 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 RPL7P41-201ENST00000485823 957 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC091917.2-201ENST00000505002 744 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC111000.3-201ENST00000508057 576 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 NMNAT1P1-201ENST00000554095 876 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 AC020910.3-201ENST00000603701 874 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 AL356608.1-201ENST00000610034 820 ntBASIC6.22□□□□□ -1.41
SNED1Q8TER0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.22□□□□□ -1.41
SNED1Q8TER0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNED1Q8TER0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNED1Q8TER0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.21□□□□□ -1.41
SNED1Q8TER0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SNED1Q8TER0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.21□□□□□ -1.41
SNED1Q8TER0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
SNED1Q8TER0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.21□□□□□ -1.41
SNED1Q8TER0 AC063976.2-201ENST00000425667 3556 ntBASIC6.21□□□□□ -1.41
SNED1Q8TER0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.21□□□□□ -1.41
SNED1Q8TER0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.21□□□□□ -1.41
SNED1Q8TER0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 ELOCP19-201ENST00000411919 318 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 BX276092.6-201ENST00000430476 250 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 RPS29P9-201ENST00000440360 171 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC012512.1-201ENST00000446594 718 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 TCEA1P1-201ENST00000449716 880 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 BX276092.8-201ENST00000455722 250 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC020779.1-201ENST00000478757 796 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 RPS24P16-201ENST00000497294 392 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC010350.1-201ENST00000504908 231 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC093720.1-201ENST00000505681 714 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC011626.1-201ENST00000604710 562 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 AC006213.4-201ENST00000616184 634 ntBASIC6.21□□□□□ -1.42
SNED1Q8TER0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 CFTRP2-201ENST00000634304 199 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms