Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 CASC19-248ENST00000641674 1356 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC011477.1-204ENST00000623416 1325 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 Y_RNA.359-201ENST00000365498 102 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 RNU6-1119P-201ENST00000384349 108 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 RNA5SP105-201ENST00000391123 113 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 DEFB108C-201ENST00000400154 252 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 ZNF37CP-201ENST00000406795 241 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 USP9YP35-201ENST00000435696 412 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC093716.1-201ENST00000435923 377 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC027124.1-201ENST00000440852 466 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 MTND1P30-201ENST00000441241 901 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AL020997.1-201ENST00000446554 349 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 SRP68P2-201ENST00000456184 254 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 TREML3P-201ENST00000457327 501 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC083806.1-201ENST00000468934 316 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 CCDC75P1-201ENST00000469247 791 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 MYL6P4-201ENST00000477911 453 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 RN7SL382P-201ENST00000482631 282 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 RN7SL152P-201ENST00000484176 298 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC104108.1-201ENST00000509930 412 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC109445.1-201ENST00000512356 383 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC008549.1-201ENST00000512900 643 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 IGKV1D-32-201ENST00000517449 318 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 EGLN3P1-201ENST00000541727 720 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC092747.2-201ENST00000545069 983 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC087481.2-201ENST00000565492 330 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC126323.4-201ENST00000566935 234 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 ROCK1P1-201ENST00000573767 549 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC009220.3-201ENST00000604318 586 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC005070.2-201ENST00000604391 260 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 LSM1P2-201ENST00000604911 322 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC018714.1-201ENST00000605028 208 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC109347.2-201ENST00000610220 349 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC138749.5-201ENST00000611461 208 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC010678.1-201ENST00000614118 713 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC009509.4-201ENST00000619202 509 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC007342.8-201ENST00000623278 678 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC124312.6-202ENST00000623624 418 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC099654.13-201ENST00000639774 207 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC112255.1-201ENST00000624070 2493 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 AC068769.1-201ENST00000474767 2426 ntBASIC5.86□□□□□ -1.47
DTX3Q8N9I9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
DTX3Q8N9I9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
DTX3Q8N9I9 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
DTX3Q8N9I9 AC129502.1-201ENST00000623261 1654 ntBASIC5.85□□□□□ -1.47
DTX3Q8N9I9 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
DTX3Q8N9I9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.85□□□□□ -1.47
DTX3Q8N9I9 ATP5BP1-201ENST00000411980 1574 ntBASIC5.85□□□□□ -1.47
DTX3Q8N9I9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DTX3Q8N9I9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.85□□□□□ -1.47
DTX3Q8N9I9 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms