Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AC008814.1-201ENST00000603797 406 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 CYP4F35P-202ENST00000636121 390 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AC006210.2-201ENST00000367074 1545 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 PCNPP4-201ENST00000414817 517 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC090589.1-201ENST00000473109 362 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 RPL7P39-201ENST00000481157 744 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC012400.1-201ENST00000518452 381 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AL359219.2-201ENST00000555184 348 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 PRPF19P1-201ENST00000584766 898 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC069307.1-201ENST00000602820 447 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 MIR4302-201ENST00000638058 60 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 MAPK10-328ENST00000641553 4009 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 TCP1P3-201ENST00000414406 1498 ntBASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC65Q8IXS2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC022417.1-201ENST00000624768 1303 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC104260.2-201ENST00000623551 3497 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC011503.2-201ENST00000594230 1500 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RNA5SP183-201ENST00000362452 119 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RNU1-74P-201ENST00000384108 171 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RN7SKP206-201ENST00000410823 293 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RNU2-22P-201ENST00000411266 212 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RPL12P9-201ENST00000412942 488 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 CFL1P1-202ENST00000432948 411 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC135999.1-201ENST00000478962 479 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 EIF3LP3-201ENST00000495197 822 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RPS4XP20-201ENST00000505751 772 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RFPL4AP5-201ENST00000514977 504 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AL049779.2-201ENST00000553847 315 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC022884.2-201ENST00000578535 580 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC109309.2-201ENST00000612597 332 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 CASC19-264ENST00000641912 1184 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 AC002525.1-201ENST00000624392 1622 ntBASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC65Q8IXS2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms