Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 AC092070.2-203ENST00000598377 3644 ntBASIC6.1□□□□□ -1.43
HERC6Q8IVU3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC6Q8IVU3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 MSL3P1-202ENST00000440028 1468 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC140479.2-201ENST00000421567 3130 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC108075.1-201ENST00000424692 529 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC092017.2-201ENST00000427600 362 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC073508.1-201ENST00000428866 656 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC006466.1-201ENST00000438721 289 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC073850.1-201ENST00000449243 255 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 HIGD1AP8-201ENST00000453927 274 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC027338.1-201ENST00000514840 825 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 RN7SKP288-201ENST00000516227 268 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC126615.2-201ENST00000553003 515 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC005242.1-201ENST00000585658 438 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 KATNBL1P5-201ENST00000605015 517 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AP002799.1-201ENST00000623552 423 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC020978.9-201ENST00000624380 1141 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AL138960.2-201ENST00000625145 535 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC6Q8IVU3 AC130304.1-201ENST00000622942 2385 ntBASIC6.09□□□□□ -1.43
HERC6Q8IVU3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HERC6Q8IVU3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HERC6Q8IVU3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
HERC6Q8IVU3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.09□□□□□ -1.44
HERC6Q8IVU3 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.09□□□□□ -1.44
HERC6Q8IVU3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AP004607.3-201ENST00000530354 3915 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 HSPA8P18-201ENST00000439846 1928 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RNA5SP339-201ENST00000390987 122 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RPS6P23-201ENST00000413224 722 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RANP4-201ENST00000413361 655 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AL121882.1-201ENST00000422893 417 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 OR6D1P-201ENST00000436165 939 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC009963.4-201ENST00000448535 339 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AL445687.2-201ENST00000458156 728 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 CR383656.1-201ENST00000484916 377 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC109462.1-201ENST00000491087 368 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 SNRPCP2-201ENST00000504370 475 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AP001922.4-201ENST00000526967 290 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 BLZF2P-201ENST00000553776 1130 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms