Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC079298.2-201ENST00000623885 459 ntBASIC5□□□□□ -1.61
NHLRC1Q6VVB1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 AC087565.3-203ENST00000641018 837 ntBASIC5□□□□□ -1.61
NHLRC1Q6VVB1 AC119674.1-212ENST00000641155 993 ntBASIC5□□□□□ -1.61
NHLRC1Q6VVB1 MIR193BHG-214ENST00000641765 509 ntBASIC5□□□□□ -1.61
NHLRC1Q6VVB1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
NHLRC1Q6VVB1 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 RNU6-666P-201ENST00000363499 107 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 RNU4-31P-201ENST00000384211 141 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AL596448.1-201ENST00000415024 392 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 RPS26P4-201ENST00000431743 355 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 LINC02210-201ENST00000444561 288 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC073109.1-201ENST00000445066 978 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 MTND5P8-201ENST00000449817 1083 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC021106.1-201ENST00000509020 1058 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 SNORA43.3-201ENST00000517240 103 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 HMGB1P46-201ENST00000520062 610 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 NPM1P35-201ENST00000533043 868 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AC015849.2-201ENST00000605738 409 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 AP001005.3-201ENST00000622049 129 ntBASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
NHLRC1Q6VVB1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC010266.2-201ENST00000564741 3255 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 RNU6-31P-201ENST00000384388 108 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 CCNB2P1-201ENST00000399411 1150 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AL009179.1-201ENST00000406085 265 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 GABARAPL3-201ENST00000412799 354 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 TRGV6-201ENST00000417928 299 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 OR5M12P-201ENST00000423388 929 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 HSPE1P16-201ENST00000426640 348 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 KCTD9P1-201ENST00000430462 1167 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 MTND2P2-201ENST00000434633 945 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 RPL23AP19-201ENST00000436229 369 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AL450023.1-201ENST00000450868 751 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AL354710.1-201ENST00000453641 246 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 NXT1P1-201ENST00000458481 316 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC018638.3-201ENST00000461273 132 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC087672.1-201ENST00000479876 766 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 SNORD46.2-201ENST00000516021 102 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AL049870.4-201ENST00000555741 486 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AP001496.3-201ENST00000580230 913 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 MIR4660-201ENST00000583549 74 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms