Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL389915.2-201ENST00000454576 441 ntBASIC6.32□□□□□ -1.4
CTR9Q6PD62 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 OR5M14P-201ENST00000506803 618 ntBASIC6.32□□□□□ -1.4
CTR9Q6PD62 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CTR9Q6PD62 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 MIR105-1-201ENST00000385222 81 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 HSPA8P15-201ENST00000401676 786 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 BRWD1P3-201ENST00000428816 390 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC023271.1-201ENST00000445936 1090 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 CBX1P2-201ENST00000453841 458 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 RN7SL197P-201ENST00000466981 299 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 SNRPCP2-201ENST00000504370 475 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC108738.1-201ENST00000603703 237 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 AC005252.1-201ENST00000604518 1063 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 MTCO1P1-201ENST00000624263 1081 ntBASIC6.31□□□□□ -1.4
CTR9Q6PD62 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTR9Q6PD62 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTR9Q6PD62 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC099654.3-201ENST00000447087 1546 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AL031595.2-201ENST00000624215 19071 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 RN7SKP97-201ENST00000410966 333 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 PTMAP6-201ENST00000439110 327 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AL359265.1-201ENST00000440296 795 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 TCEA1P3-201ENST00000443005 880 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 RPS18P6-201ENST00000476880 458 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 RPL7P40-201ENST00000481703 745 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 IGBP1P4-201ENST00000503202 879 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 SEPT10P1-201ENST00000517342 1162 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 MIR3691-201ENST00000578066 90 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 MIR4472-2-201ENST00000582069 67 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC095055.1-201ENST00000603472 1113 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC009027.1-201ENST00000604510 479 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AL445222.1-201ENST00000607259 628 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC211433.2-201ENST00000608433 387 ntBASIC6.3□□□□□ -1.4
CTR9Q6PD62 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.3□□□□□ -1.4
CTR9Q6PD62 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTR9Q6PD62 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms