Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MIR600-201ENST00000385007 98 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AL731534.1-201ENST00000434711 269 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RPL6P5-201ENST00000445678 828 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 VN1R34P-201ENST00000447387 883 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AC114755.5-201ENST00000447760 831 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AC011276.1-201ENST00000469688 323 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RN7SL319P-201ENST00000480656 221 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 KCTD9P4-201ENST00000526766 1166 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AP005131.7-201ENST00000610087 611 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AC007998.4-201ENST00000612496 2533 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AL590240.1-201ENST00000334118 313 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AL121886.1-201ENST00000358609 435 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 MIR132-201ENST00000591554 101 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC022916.3-201ENST00000592961 742 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 MSL3P1-202ENST00000440028 1468 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC005618.1-201ENST00000606901 3148 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC068446.1-201ENST00000556425 1549 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC100757.1-201ENST00000616872 1835 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 U3.10-201ENST00000364459 214 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 OR2B7P-201ENST00000429302 934 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 RPL7P19-201ENST00000469948 618 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC073358.1-201ENST00000505671 684 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 SNORA67.7-201ENST00000516664 135 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 AL121890.3-201ENST00000618494 516 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 CYP1D1P-201ENST00000416662 1433 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 RBPJP2-201ENST00000618187 1444 ntBASIC5.04□□□□□ -1.6
RIF1Q5UIP0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIF1Q5UIP0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 MIR298-201ENST00000401212 88 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC114755.2-201ENST00000413520 361 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC007562.1-201ENST00000421819 517 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 RPS4XP16-201ENST00000427198 791 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC023274.2-201ENST00000445264 521 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 FTH1P25-201ENST00000447665 469 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 RN7SKP276-201ENST00000516242 268 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC096921.1-201ENST00000411661 375 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 RPL12P43-201ENST00000420608 499 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 GAPDHP49-201ENST00000421421 961 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC010733.1-201ENST00000451515 401 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 RN7SL542P-201ENST00000467147 294 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AP005119.2-201ENST00000579735 1105 ntBASIC5.03□□□□□ -1.6
RIF1Q5UIP0 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RIF1Q5UIP0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms