Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC087392.3-202ENST00000358446 1754 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 RNU6-560P-201ENST00000364007 108 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 Y_RNA.372-201ENST00000365599 102 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 CCNG1P1-201ENST00000406783 885 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 TRIM60P16-201ENST00000444048 694 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 TVP23CP1-201ENST00000450317 639 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC009963.3-201ENST00000458090 486 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC013267.1-201ENST00000458227 267 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 RPS14P8-201ENST00000478778 369 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 VPS26AP1-201ENST00000483197 979 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC006499.5-201ENST00000505037 514 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC073358.1-201ENST00000505671 684 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 NPM1P52-201ENST00000518264 846 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 NPIPB14P-203ENST00000532298 987 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC010928.3-201ENST00000587712 541 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AP001267.4-201ENST00000602598 545 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC008536.2-201ENST00000607284 349 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 U1.41-201ENST00000617626 165 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC109454.4-201ENST00000623411 649 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AP003122.6-201ENST00000623831 495 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 AC073488.6-201ENST00000632293 754 ntBASIC8.44□□□□□ -1.06
RC3H1Q5TC82 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC007406.5-201ENST00000570140 3170 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 COX6B1P3-201ENST00000312310 260 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 snoZ40.1-201ENST00000364540 72 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 FCF1P10-201ENST00000407590 479 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 OFD1P2Y-201ENST00000421895 1149 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 SLC44A3-AS1-205ENST00000424505 612 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 PA2G4P6-201ENST00000438325 1197 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AL592437.1-201ENST00000443781 492 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 COX6CP12-201ENST00000446748 202 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC073072.2-201ENST00000447425 348 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 RPL7P51-201ENST00000490532 749 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 RPS10P20-201ENST00000494130 463 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC105252.1-201ENST00000503089 286 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC011352.2-201ENST00000514574 1016 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 LRRC34P2-201ENST00000514850 553 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC012146.2-201ENST00000576545 416 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 MIR4701-201ENST00000583094 63 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms