Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC073136.2-201ENST00000417282 849 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 RPL6P21-201ENST00000418672 846 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC122718.2-201ENST00000505325 591 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 RN7SKP46-201ENST00000515942 234 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 SCARNA16.4-201ENST00000516956 187 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC026826.3-201ENST00000561747 158 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC005341.1-201ENST00000571086 708 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AP001496.3-201ENST00000580230 913 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC015802.2-201ENST00000589690 189 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC087468.1-201ENST00000604365 630 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AL162431.4-201ENST00000604674 411 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AP003499.2-201ENST00000624100 483 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC063923.1-201ENST00000478982 1619 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 RN7SKP125-201ENST00000410481 302 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AL359839.1-201ENST00000451975 1160 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 LRRC37A14P-201ENST00000452297 462 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 LDHBP2-201ENST00000456969 1005 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 NIFKP7-201ENST00000503365 834 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 RNA5SP303-201ENST00000516192 130 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 RNU6-964P-201ENST00000516524 69 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 NRBF2P4-201ENST00000520874 850 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC027369.2-201ENST00000528030 440 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 BTG1P1-201ENST00000540396 508 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AL158196.1-201ENST00000616786 434 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 AC015914.2-201ENST00000618167 288 ntBASIC4.68□□□□□ -1.66
CCDC58Q4VC31 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC58Q4VC31 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AL133243.3-201ENST00000617415 3004 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 DDX18P4-201ENST00000511690 1966 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 SALL4P2-201ENST00000423288 2910 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 OR7E25P-201ENST00000344844 931 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 RNA5SP223-201ENST00000365174 120 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 RNU4-2-201ENST00000365668 141 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AL133173.1-201ENST00000423458 397 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AL161722.2-201ENST00000434731 981 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 RPL35AP21-201ENST00000437667 333 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AMYP1-201ENST00000440059 1023 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 NOP56P2-201ENST00000447491 769 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 TCP11X3P-202ENST00000514289 1254 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 NPM1P6-201ENST00000521088 871 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms