Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CCDC144BQ3MJ40 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC093311.1-201ENST00000506586 2021 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 MFSD8-219ENST00000641228 2559 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 TMSB4XP4-201ENST00000323496 618 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 TMSB4XP2-201ENST00000335179 210 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 RNA5SP350-201ENST00000363298 111 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 SNORA62.2-201ENST00000364672 152 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AL021331.1-201ENST00000402817 582 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 SSR1P2-201ENST00000415208 787 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 LINC01881-201ENST00000416103 412 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC079355.1-201ENST00000421770 223 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 RPL12P12-201ENST00000424633 501 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AL445687.2-201ENST00000458156 728 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AL139824.2-201ENST00000458731 1095 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 snoU13.29-201ENST00000459370 104 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC068587.2-201ENST00000478386 781 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 Y_RNA.710-201ENST00000516975 110 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 IGKV2D-10-201ENST00000520194 281 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AL451049.1-201ENST00000608672 497 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC013468.1-201ENST00000608680 598 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 RBMY1HP-201ENST00000382759 1389 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 CR788268.1-201ENST00000603931 1809 ntBASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC144BQ3MJ40 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CCDC144BQ3MJ40 DDX18P4-201ENST00000511690 1966 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 GUCY1B2-204ENST00000531898 1979 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 RBPJP2-201ENST00000618187 1444 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL137100.1-201ENST00000556703 1620 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 RNU6-225P-201ENST00000384613 103 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 Y_RNA.578-201ENST00000390903 88 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL132875.1-201ENST00000403623 949 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 RNA5SP156-201ENST00000410250 110 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC245096.1-201ENST00000413104 546 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL449283.1-202ENST00000418249 604 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 OR51A6P-201ENST00000418680 1004 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC079922.1-201ENST00000443291 359 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL161636.2-201ENST00000445179 927 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC005077.1-201ENST00000449226 375 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 ZNF886P-201ENST00000450781 723 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL133244.1-201ENST00000456007 258 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL157777.1-201ENST00000468100 304 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 RN7SL273P-201ENST00000481561 299 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms