Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RFX4Q33E94 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX4Q33E94 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RFX4Q33E94 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 RNU4-2-201ENST00000365668 141 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 RNU2-18P-201ENST00000411224 162 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 AC013429.2-201ENST00000418798 781 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 RPL24P2-201ENST00000421023 475 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC009238.2-201ENST00000431026 355 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 CYCSP34-201ENST00000458172 304 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 RN7SL189P-201ENST00000468631 289 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.86□□□□□ -1.63
RFX4Q33E94 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC233702.9-201ENST00000581528 203 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX4Q33E94 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 AL162431.4-201ENST00000604674 411 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 MIR8069-1-201ENST00000616627 86 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 MIR8069-2-201ENST00000621412 86 ntBASIC4.86□□□□□ -1.63
RFX4Q33E94 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX4Q33E94 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RFX4Q33E94 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX4Q33E94 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RFX4Q33E94 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
RFX4Q33E94 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX4Q33E94 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX4Q33E94 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX4Q33E94 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFX4Q33E94 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX4Q33E94 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX4Q33E94 AC023490.2-201ENST00000359859 470 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 RN7SKP28-201ENST00000364770 305 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX4Q33E94 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 AC002524.1-201ENST00000411687 547 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 Z68694.1-201ENST00000413929 841 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 NPM1P22-201ENST00000427761 952 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 Z84478.1-201ENST00000438230 1219 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 MTND6P5-201ENST00000448266 512 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 AL035090.1-201ENST00000454835 332 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 PFN1P8-201ENST00000497012 543 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX4Q33E94 HMGB1P44-201ENST00000508597 572 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 RN7SKP70-201ENST00000516655 271 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 SCARNA16.4-201ENST00000516956 187 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 CYCSP22-201ENST00000517555 339 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.85□□□□□ -1.63
RFX4Q33E94 NRBF2P4-201ENST00000520874 850 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 RPL23AP53-201ENST00000521854 457 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 AC005363.1-201ENST00000530779 351 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFX4Q33E94 RBM22P12-201ENST00000567098 1255 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 AC005341.1-201ENST00000571086 708 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX4Q33E94 AC008115.3-201ENST00000614874 549 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 AL118522.2-201ENST00000616045 615 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 AC108359.1-201ENST00000616451 1211 ntBASIC4.85□□□□□ -1.63
RFX4Q33E94 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX4Q33E94 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX4Q33E94 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX4Q33E94 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms