Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 AL451142.2-201ENST00000429076 2090 ntBASIC4.42□□□□□ -1.7
USF2Q15853 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
USF2Q15853 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
USF2Q15853 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
USF2Q15853 RNU1-65P-201ENST00000363919 148 ntBASIC4.42□□□□□ -1.7
USF2Q15853 CXADRP1-201ENST00000398098 1095 ntBASIC4.42□□□□□ -1.7
USF2Q15853 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.42□□□□□ -1.7
USF2Q15853 AL357752.1-201ENST00000412817 349 ntBASIC4.42□□□□□ -1.7
USF2Q15853 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.42□□□□□ -1.7
USF2Q15853 AC093084.1-201ENST00000424233 687 ntBASIC4.42□□□□□ -1.7
USF2Q15853 SEC63P1-201ENST00000425785 1258 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 GAPDHP48-201ENST00000436626 961 ntBASIC4.42□□□□□ -1.7
USF2Q15853 PCNPP2-201ENST00000441651 455 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
USF2Q15853 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 PPIAP27-201ENST00000453800 265 ntBASIC4.42□□□□□ -1.7
USF2Q15853 CST12P-201ENST00000457644 362 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AC023194.2-201ENST00000465398 406 ntBASIC4.42□□□□□ -1.7
USF2Q15853 RN7SL57P-201ENST00000493687 290 ntBASIC4.42□□□□□ -1.7
USF2Q15853 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 LDHAP1-201ENST00000509421 992 ntBASIC4.42□□□□□ -1.7
USF2Q15853 NDUFB4P12-201ENST00000513465 390 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 RNA5SP340-201ENST00000517132 107 ntBASIC4.42□□□□□ -1.7
USF2Q15853 MTCYBP19-201ENST00000517463 1124 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 IGLV3-30-201ENST00000524362 298 ntBASIC4.42□□□□□ -1.7
USF2Q15853 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.42□□□□□ -1.7
USF2Q15853 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.42□□□□□ -1.7
USF2Q15853 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.42□□□□□ -1.7
USF2Q15853 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.42□□□□□ -1.7
USF2Q15853 AC139697.1-201ENST00000548429 745 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.42□□□□□ -1.7
USF2Q15853 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.42□□□□□ -1.7
USF2Q15853 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.42□□□□□ -1.7
USF2Q15853 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.42□□□□□ -1.7
USF2Q15853 AP001437.1-201ENST00000608783 456 ntBASIC4.42□□□□□ -1.7
USF2Q15853 MIR6793-201ENST00000612376 63 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AC116447.1-201ENST00000613153 453 ntBASIC4.42□□□□□ -1.7
USF2Q15853 CXADRP3-202ENST00000617265 1100 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AC021766.1-201ENST00000624404 741 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AC073593.1-201ENST00000624500 411 ntBASIC4.42□□□□□ -1.7
USF2Q15853 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.42□□□□□ -1.7
USF2Q15853 AL596275.2-204ENST00000641628 552 ntBASIC4.42□□□□□ -1.7
USF2Q15853 AL596275.2-206ENST00000641957 626 ntBASIC4.42□□□□□ -1.7
USF2Q15853 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.42□□□□□ -1.7
USF2Q15853 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.42□□□□□ -1.7
USF2Q15853 AC104966.1-201ENST00000467010 1464 ntBASIC4.42□□□□□ -1.7
USF2Q15853 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USF2Q15853 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.42□□□□□ -1.7
USF2Q15853 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.41□□□□□ -1.7
USF2Q15853 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 AC114546.3-201ENST00000623582 1734 ntBASIC4.41□□□□□ -1.7
USF2Q15853 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.41□□□□□ -1.7
USF2Q15853 AL356317.1-201ENST00000396110 1436 ntBASIC4.41□□□□□ -1.7
USF2Q15853 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
USF2Q15853 MIR1275-201ENST00000408770 80 ntBASIC4.41□□□□□ -1.7
USF2Q15853 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.41□□□□□ -1.7
USF2Q15853 BX284632.2-201ENST00000421091 399 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.41□□□□□ -1.7
USF2Q15853 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.41□□□□□ -1.7
USF2Q15853 AC002069.1-201ENST00000429649 1159 ntBASIC4.41□□□□□ -1.7
USF2Q15853 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.41□□□□□ -1.7
USF2Q15853 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.41□□□□□ -1.7
USF2Q15853 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.41□□□□□ -1.7
USF2Q15853 AL512605.1-202ENST00000441919 381 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AL359955.2-201ENST00000445380 353 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.41□□□□□ -1.7
USF2Q15853 AL162388.1-201ENST00000450912 352 ntBASIC4.41□□□□□ -1.7
USF2Q15853 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.41□□□□□ -1.7
USF2Q15853 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.41□□□□□ -1.7
USF2Q15853 AC011225.1-201ENST00000457751 369 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC068228.1-201ENST00000461723 211 ntBASIC4.41□□□□□ -1.7
USF2Q15853 RPS23P2-201ENST00000463671 415 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC104339.1-201ENST00000465478 348 ntBASIC4.41□□□□□ -1.7
USF2Q15853 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms