Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC027026.1-201ENST00000532323 742 ntBASIC5.21□□□□□ -1.58
LTBQ06643 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.21□□□□□ -1.58
LTBQ06643 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.21□□□□□ -1.58
LTBQ06643 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.21□□□□□ -1.58
LTBQ06643 AC090888.2-201ENST00000559765 1144 ntBASIC5.21□□□□□ -1.58
LTBQ06643 HIRAP1-201ENST00000605318 787 ntBASIC5.21□□□□□ -1.58
LTBQ06643 AC012557.1-201ENST00000607115 611 ntBASIC5.21□□□□□ -1.58
LTBQ06643 OR7M1P-201ENST00000608946 533 ntBASIC5.21□□□□□ -1.58
LTBQ06643 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.21□□□□□ -1.58
LTBQ06643 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.21□□□□□ -1.58
LTBQ06643 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.21□□□□□ -1.58
LTBQ06643 AL158152.1-201ENST00000602652 1435 ntBASIC5.21□□□□□ -1.58
LTBQ06643 MRRFP1-201ENST00000435941 1675 ntBASIC5.21□□□□□ -1.58
LTBQ06643 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LTBQ06643 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LTBQ06643 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.2□□□□□ -1.58
LTBQ06643 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 AC140479.2-201ENST00000421567 3130 ntBASIC5.2□□□□□ -1.58
LTBQ06643 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 RNU1-150P-201ENST00000362491 162 ntBASIC5.2□□□□□ -1.58
LTBQ06643 RN7SKP74-201ENST00000362849 309 ntBASIC5.2□□□□□ -1.58
LTBQ06643 RNU4-40P-201ENST00000364351 143 ntBASIC5.2□□□□□ -1.58
LTBQ06643 RNU6-40P-201ENST00000384254 107 ntBASIC5.2□□□□□ -1.58
LTBQ06643 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 NPM1P4-201ENST00000414095 812 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC017078.1-201ENST00000416146 368 ntBASIC5.2□□□□□ -1.58
LTBQ06643 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 AC092570.3-201ENST00000420113 693 ntBASIC5.2□□□□□ -1.58
LTBQ06643 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.2□□□□□ -1.58
LTBQ06643 PCBP2P1-201ENST00000437262 977 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AL117351.1-201ENST00000438864 766 ntBASIC5.2□□□□□ -1.58
LTBQ06643 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.2□□□□□ -1.58
LTBQ06643 RPS26P41-201ENST00000450370 284 ntBASIC5.2□□□□□ -1.58
LTBQ06643 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 AL122020.1-201ENST00000472287 459 ntBASIC5.2□□□□□ -1.58
LTBQ06643 SIAH1P1-201ENST00000479411 923 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC099521.1-201ENST00000482557 334 ntBASIC5.2□□□□□ -1.58
LTBQ06643 OR9N1P-201ENST00000491296 333 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 AC021146.5-201ENST00000503544 545 ntBASIC5.2□□□□□ -1.58
LTBQ06643 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 AC111000.6-201ENST00000514471 709 ntBASIC5.2□□□□□ -1.58
LTBQ06643 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.2□□□□□ -1.58
LTBQ06643 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 LRRC34P1-201ENST00000542742 915 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
LTBQ06643 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
LTBQ06643 AGGF1P5-201ENST00000567900 919 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.2□□□□□ -1.58
LTBQ06643 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 AC068620.3-201ENST00000602749 560 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC025811.1-201ENST00000604312 472 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC114878.2-201ENST00000604863 1251 ntBASIC5.2□□□□□ -1.58
LTBQ06643 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.2□□□□□ -1.58
LTBQ06643 AC079395.2-201ENST00000610982 737 ntBASIC5.2□□□□□ -1.58
LTBQ06643 MIR7155-201ENST00000615925 56 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC018926.1-201ENST00000616335 435 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AL590410.1-201ENST00000617925 333 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AC068880.4-201ENST00000623082 495 ntBASIC5.2□□□□□ -1.58
LTBQ06643 AL691477.1-201ENST00000624398 162 ntBASIC5.2□□□□□ -1.58
LTBQ06643 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
LTBQ06643 ICE2P1-201ENST00000512800 1849 ntBASIC5.2□□□□□ -1.58
LTBQ06643 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LTBQ06643 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LTBQ06643 AL161901.1-201ENST00000624954 3425 ntBASIC5.2□□□□□ -1.58
LTBQ06643 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.2□□□□□ -1.58
LTBQ06643 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LTBQ06643 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms