Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.36□□□□□ -1.55
CBX1P83916 RPSAP75-201ENST00000605848 301 ntBASIC5.36□□□□□ -1.55
CBX1P83916 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.36□□□□□ -1.55
CBX1P83916 AC109583.2-201ENST00000617367 129 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.36□□□□□ -1.55
CBX1P83916 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CBX1P83916 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.36□□□□□ -1.55
CBX1P83916 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CBX1P83916 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CBX1P83916 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.35□□□□□ -1.55
CBX1P83916 MTND5P23-201ENST00000430812 1655 ntBASIC5.35□□□□□ -1.55
CBX1P83916 AC245100.2-201ENST00000454544 1679 ntBASIC5.35□□□□□ -1.55
CBX1P83916 HSPD1P9-201ENST00000420325 1636 ntBASIC5.35□□□□□ -1.55
CBX1P83916 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CBX1P83916 MAPK10-303ENST00000641324 3959 ntBASIC5.35□□□□□ -1.55
CBX1P83916 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 RNU1-83P-201ENST00000363426 164 ntBASIC5.35□□□□□ -1.55
CBX1P83916 RNA5SP132-201ENST00000364725 118 ntBASIC5.35□□□□□ -1.55
CBX1P83916 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CBX1P83916 DBIP1-201ENST00000401435 260 ntBASIC5.35□□□□□ -1.55
CBX1P83916 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.35□□□□□ -1.55
CBX1P83916 NAP1L4P2-201ENST00000425958 899 ntBASIC5.35□□□□□ -1.55
CBX1P83916 OR6C71P-201ENST00000432580 913 ntBASIC5.35□□□□□ -1.55
CBX1P83916 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.35□□□□□ -1.55
CBX1P83916 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.35□□□□□ -1.55
CBX1P83916 SNRPFP2-201ENST00000440710 251 ntBASIC5.35□□□□□ -1.55
CBX1P83916 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.35□□□□□ -1.55
CBX1P83916 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.35□□□□□ -1.55
CBX1P83916 PPM1AP1-201ENST00000502740 1135 ntBASIC5.35□□□□□ -1.55
CBX1P83916 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.35□□□□□ -1.55
CBX1P83916 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.35□□□□□ -1.55
CBX1P83916 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.35□□□□□ -1.55
CBX1P83916 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.35□□□□□ -1.55
CBX1P83916 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.35□□□□□ -1.55
CBX1P83916 TDGP1-201ENST00000543961 1229 ntBASIC5.35□□□□□ -1.55
CBX1P83916 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.35□□□□□ -1.55
CBX1P83916 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CBX1P83916 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 AC115989.2-201ENST00000578640 563 ntBASIC5.35□□□□□ -1.55
CBX1P83916 AC133552.5-201ENST00000604266 540 ntBASIC5.35□□□□□ -1.55
CBX1P83916 AC234782.5-201ENST00000617723 324 ntBASIC5.35□□□□□ -1.55
CBX1P83916 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.35□□□□□ -1.55
CBX1P83916 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CBX1P83916 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.35□□□□□ -1.55
CBX1P83916 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CBX1P83916 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.34□□□□□ -1.55
CBX1P83916 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CBX1P83916 MIR448-201ENST00000362131 111 ntBASIC5.34□□□□□ -1.55
CBX1P83916 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 AL139805.1-201ENST00000407837 289 ntBASIC5.34□□□□□ -1.55
CBX1P83916 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.34□□□□□ -1.55
CBX1P83916 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.34□□□□□ -1.55
CBX1P83916 AL121578.1-201ENST00000428051 892 ntBASIC5.34□□□□□ -1.55
CBX1P83916 AC005033.1-201ENST00000428904 813 ntBASIC5.34□□□□□ -1.55
CBX1P83916 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 HMGN1P32-201ENST00000441744 256 ntBASIC5.34□□□□□ -1.55
CBX1P83916 AC092601.1-201ENST00000444526 383 ntBASIC5.34□□□□□ -1.55
CBX1P83916 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.34□□□□□ -1.55
CBX1P83916 AC002553.2-201ENST00000453217 340 ntBASIC5.34□□□□□ -1.55
CBX1P83916 RBMY2HP-201ENST00000457961 720 ntBASIC5.34□□□□□ -1.55
CBX1P83916 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.34□□□□□ -1.55
CBX1P83916 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX1P83916 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.34□□□□□ -1.55
CBX1P83916 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.34□□□□□ -1.55
CBX1P83916 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.34□□□□□ -1.55
CBX1P83916 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX1P83916 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.34□□□□□ -1.55
CBX1P83916 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX1P83916 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.34□□□□□ -1.55
CBX1P83916 ATP5J2P6-201ENST00000565203 266 ntBASIC5.34□□□□□ -1.55
CBX1P83916 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.34□□□□□ -1.55
CBX1P83916 AP005119.2-201ENST00000579735 1105 ntBASIC5.34□□□□□ -1.55
CBX1P83916 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.34□□□□□ -1.55
CBX1P83916 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX1P83916 SNORA35B-201ENST00000607417 129 ntBASIC5.34□□□□□ -1.55
CBX1P83916 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CBX1P83916 AL669942.2-201ENST00000620352 697 ntBASIC5.34□□□□□ -1.55
CBX1P83916 MIR8080-201ENST00000622224 89 ntBASIC5.34□□□□□ -1.55
CBX1P83916 AL122023.1-201ENST00000622847 530 ntBASIC5.34□□□□□ -1.55
CBX1P83916 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.34□□□□□ -1.55
CBX1P83916 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.34□□□□□ -1.55
CBX1P83916 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX1P83916 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CBX1P83916 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms