Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC087283.1-201ENST00000604029 1074 ntBASIC6.04□□□□□ -1.44
CCNA1P78396 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.04□□□□□ -1.44
CCNA1P78396 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCNA1P78396 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCNA1P78396 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCNA1P78396 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
CCNA1P78396 AC005261.6-201ENST00000623072 1387 ntBASIC6.04□□□□□ -1.44
CCNA1P78396 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCNA1P78396 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.04□□□□□ -1.44
CCNA1P78396 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCNA1P78396 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCNA1P78396 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 AC010132.2-201ENST00000295493 1043 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 RN7SKP149-201ENST00000363008 344 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AL353625.1-202ENST00000366273 571 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 CYB5AP4-201ENST00000396692 399 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 MIR1182-201ENST00000408363 97 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 AC013268.2-201ENST00000420753 337 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.03□□□□□ -1.44
CCNA1P78396 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.03□□□□□ -1.44
CCNA1P78396 RPS29P10-201ENST00000439197 166 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.03□□□□□ -1.44
CCNA1P78396 REG1CP-206ENST00000447469 496 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AC104849.1-201ENST00000462623 405 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.03□□□□□ -1.44
CCNA1P78396 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.03□□□□□ -1.44
CCNA1P78396 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.03□□□□□ -1.44
CCNA1P78396 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.03□□□□□ -1.44
CCNA1P78396 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 AC063949.1-201ENST00000552900 865 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.03□□□□□ -1.44
CCNA1P78396 MIPEPP2-201ENST00000422560 1819 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 AC004158.1-201ENST00000564508 4319 ntBASIC6.03□□□□□ -1.44
CCNA1P78396 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.03□□□□□ -1.44
CCNA1P78396 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCNA1P78396 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.02□□□□□ -1.44
CCNA1P78396 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
CCNA1P78396 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCNA1P78396 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
CCNA1P78396 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.02□□□□□ -1.45
CCNA1P78396 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCNA1P78396 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCNA1P78396 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CCNA1P78396 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CCNA1P78396 AC092681.1-201ENST00000297369 291 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 RNA5SP455-201ENST00000365190 119 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 RNA5SP87-201ENST00000384155 118 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 OR8V1P-201ENST00000395193 873 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 AC007068.1-201ENST00000396690 844 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 HMGB1P32-201ENST00000425971 565 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.02□□□□□ -1.45
CCNA1P78396 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.02□□□□□ -1.45
CCNA1P78396 PRPF38AP2-201ENST00000438179 851 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.02□□□□□ -1.45
CCNA1P78396 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.02□□□□□ -1.45
CCNA1P78396 ELOCP3-201ENST00000439303 348 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.02□□□□□ -1.45
CCNA1P78396 KNOP1P3-201ENST00000446933 426 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 TPT1P13-201ENST00000449760 499 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 HMGN2P25-201ENST00000486956 268 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCNA1P78396 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.02□□□□□ -1.45
CCNA1P78396 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.02□□□□□ -1.45
CCNA1P78396 AC008033.2-201ENST00000542626 177 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.02□□□□□ -1.45
CCNA1P78396 AC137768.1-201ENST00000549998 553 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.02□□□□□ -1.45
CCNA1P78396 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.02□□□□□ -1.45
CCNA1P78396 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.02□□□□□ -1.45
CCNA1P78396 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
CCNA1P78396 AP001267.4-201ENST00000602598 545 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 AC073575.2-201ENST00000614212 627 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 AL356752.1-201ENST00000615844 593 ntBASIC6.02□□□□□ -1.45
CCNA1P78396 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.02□□□□□ -1.45
CCNA1P78396 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.02□□□□□ -1.45
CCNA1P78396 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCNA1P78396 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CCNA1P78396 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.02□□□□□ -1.45
CCNA1P78396 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCNA1P78396 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CCNA1P78396 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCNA1P78396 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCNA1P78396 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.01□□□□□ -1.45
CCNA1P78396 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CCNA1P78396 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms