Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LMO4P61968 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 SNORA70.9-201ENST00000384370 135 ntBASIC4.47□□□□□ -1.69
LMO4P61968 RSL24D1P1-201ENST00000404972 493 ntBASIC4.47□□□□□ -1.69
LMO4P61968 OR51A6P-201ENST00000418680 1004 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.47□□□□□ -1.69
LMO4P61968 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.47□□□□□ -1.69
LMO4P61968 UBE2V1P6-201ENST00000430840 422 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 OTX2P1-201ENST00000450956 354 ntBASIC4.47□□□□□ -1.69
LMO4P61968 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.47□□□□□ -1.69
LMO4P61968 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.47□□□□□ -1.69
LMO4P61968 AC239798.3-201ENST00000454459 408 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 AL356390.1-201ENST00000455684 397 ntBASIC4.47□□□□□ -1.69
LMO4P61968 RN7SL188P-201ENST00000469842 285 ntBASIC4.47□□□□□ -1.69
LMO4P61968 RPL7AP6-201ENST00000477943 801 ntBASIC4.47□□□□□ -1.69
LMO4P61968 BX284632.1-201ENST00000478218 541 ntBASIC4.47□□□□□ -1.69
LMO4P61968 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.47□□□□□ -1.69
LMO4P61968 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 ST13P12-201ENST00000508958 1094 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 RNA5SP373-201ENST00000517271 95 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC026407.1-201ENST00000518369 204 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 AC127381.1-201ENST00000555979 939 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.47□□□□□ -1.69
LMO4P61968 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 RN7SL708P-201ENST00000580952 299 ntBASIC4.47□□□□□ -1.69
LMO4P61968 FAM60CP-201ENST00000591086 664 ntBASIC4.47□□□□□ -1.69
LMO4P61968 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
LMO4P61968 AC095055.1-201ENST00000603472 1113 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC015802.5-201ENST00000607478 399 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC004948.1-201ENST00000609858 672 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AP000770.2-201ENST00000623694 100 ntBASIC4.47□□□□□ -1.69
LMO4P61968 AC073869.8-201ENST00000641806 335 ntBASIC4.47□□□□□ -1.69
LMO4P61968 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 MSL3P1-202ENST00000440028 1468 ntBASIC4.47□□□□□ -1.69
LMO4P61968 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
LMO4P61968 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LMO4P61968 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.46□□□□□ -1.69
LMO4P61968 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
LMO4P61968 AC068446.1-201ENST00000556425 1549 ntBASIC4.46□□□□□ -1.69
LMO4P61968 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LMO4P61968 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LMO4P61968 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
LMO4P61968 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.46□□□□□ -1.69
LMO4P61968 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LMO4P61968 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
LMO4P61968 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LMO4P61968 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LMO4P61968 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 AL512283.1-201ENST00000606756 1384 ntBASIC4.46□□□□□ -1.7
LMO4P61968 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LMO4P61968 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LMO4P61968 AL451142.1-201ENST00000375867 775 ntBASIC4.46□□□□□ -1.7
LMO4P61968 RNU1-106P-201ENST00000384382 164 ntBASIC4.46□□□□□ -1.7
LMO4P61968 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 ZFAND6P1-201ENST00000434138 605 ntBASIC4.46□□□□□ -1.7
LMO4P61968 MAPRE1P3-201ENST00000435438 796 ntBASIC4.46□□□□□ -1.7
LMO4P61968 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 RNF2P1-201ENST00000442955 1010 ntBASIC4.46□□□□□ -1.7
LMO4P61968 CEACAMP7-201ENST00000444105 496 ntBASIC4.46□□□□□ -1.7
LMO4P61968 MTND2P25-201ENST00000449028 610 ntBASIC4.46□□□□□ -1.7
LMO4P61968 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms