Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RPL23P2-201ENST00000320371 421 ntBASIC5.05□□□□□ -1.6
VSX2P58304 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.05□□□□□ -1.6
VSX2P58304 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VSX2P58304 RNU4-34P-201ENST00000410431 124 ntBASIC5.05□□□□□ -1.6
VSX2P58304 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.05□□□□□ -1.6
VSX2P58304 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.05□□□□□ -1.6
VSX2P58304 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.05□□□□□ -1.6
VSX2P58304 RN7SL222P-201ENST00000476452 299 ntBASIC5.05□□□□□ -1.6
VSX2P58304 AC093827.1-201ENST00000480094 861 ntBASIC5.05□□□□□ -1.6
VSX2P58304 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.05□□□□□ -1.6
VSX2P58304 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 RNA5SP230-201ENST00000517039 122 ntBASIC5.05□□□□□ -1.6
VSX2P58304 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.05□□□□□ -1.6
VSX2P58304 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.05□□□□□ -1.6
VSX2P58304 HAUS8P1-201ENST00000549005 542 ntBASIC5.05□□□□□ -1.6
VSX2P58304 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.05□□□□□ -1.6
VSX2P58304 OR11J2P-201ENST00000555298 907 ntBASIC5.05□□□□□ -1.6
VSX2P58304 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.05□□□□□ -1.6
VSX2P58304 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VSX2P58304 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 AC079298.1-201ENST00000625026 1619 ntBASIC5.05□□□□□ -1.6
VSX2P58304 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
VSX2P58304 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.04□□□□□ -1.6
VSX2P58304 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.04□□□□□ -1.6
VSX2P58304 RNU1-19P-201ENST00000363306 165 ntBASIC5.04□□□□□ -1.6
VSX2P58304 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VSX2P58304 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.04□□□□□ -1.6
VSX2P58304 DPPA2P3-201ENST00000411853 655 ntBASIC5.04□□□□□ -1.6
VSX2P58304 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.04□□□□□ -1.6
VSX2P58304 AL136231.1-201ENST00000429407 730 ntBASIC5.04□□□□□ -1.6
VSX2P58304 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 Z92846.1-201ENST00000456203 268 ntBASIC5.04□□□□□ -1.6
VSX2P58304 AC005532.2-201ENST00000467154 373 ntBASIC5.04□□□□□ -1.6
VSX2P58304 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.04□□□□□ -1.6
VSX2P58304 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.04□□□□□ -1.6
VSX2P58304 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.04□□□□□ -1.6
VSX2P58304 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.04□□□□□ -1.6
VSX2P58304 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 AC007342.5-201ENST00000571340 2142 ntBASIC5.04□□□□□ -1.6
VSX2P58304 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.04□□□□□ -1.6
VSX2P58304 AC092944.2-201ENST00000605443 889 ntBASIC5.04□□□□□ -1.6
VSX2P58304 AC211433.2-201ENST00000608433 387 ntBASIC5.04□□□□□ -1.6
VSX2P58304 AC008833.1-201ENST00000611633 691 ntBASIC5.04□□□□□ -1.6
VSX2P58304 MIR6719-201ENST00000622428 87 ntBASIC5.04□□□□□ -1.6
VSX2P58304 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 HSPA8P14-201ENST00000552265 1805 ntBASIC5.04□□□□□ -1.6
VSX2P58304 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.04□□□□□ -1.6
VSX2P58304 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VSX2P58304 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VSX2P58304 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VSX2P58304 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VSX2P58304 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VSX2P58304 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VSX2P58304 AC109780.1-201ENST00000451768 1344 ntBASIC5.03□□□□□ -1.6
VSX2P58304 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
VSX2P58304 AC092747.4-201ENST00000620519 1861 ntBASIC5.03□□□□□ -1.6
VSX2P58304 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
VSX2P58304 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
VSX2P58304 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VSX2P58304 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.03□□□□□ -1.6
VSX2P58304 RN7SKP126-201ENST00000411143 300 ntBASIC5.03□□□□□ -1.6
VSX2P58304 GPS2P1-201ENST00000411761 986 ntBASIC5.03□□□□□ -1.6
VSX2P58304 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.03□□□□□ -1.6
VSX2P58304 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.03□□□□□ -1.6
VSX2P58304 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.03□□□□□ -1.6
VSX2P58304 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.03□□□□□ -1.6
VSX2P58304 AC009784.1-201ENST00000426484 460 ntBASIC5.03□□□□□ -1.6
VSX2P58304 EEF1B2P5-201ENST00000444820 548 ntBASIC5.03□□□□□ -1.6
VSX2P58304 TAAR4P-201ENST00000454843 1039 ntBASIC5.03□□□□□ -1.6
VSX2P58304 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
VSX2P58304 AC114982.2-201ENST00000461396 358 ntBASIC5.03□□□□□ -1.6
VSX2P58304 AC009127.1-201ENST00000467090 155 ntBASIC5.03□□□□□ -1.6
VSX2P58304 RN7SL727P-201ENST00000482164 296 ntBASIC5.03□□□□□ -1.6
VSX2P58304 AC022133.1-201ENST00000490961 571 ntBASIC5.03□□□□□ -1.6
VSX2P58304 RPL15P21-201ENST00000495592 567 ntBASIC5.03□□□□□ -1.6
VSX2P58304 GTF2F2P1-201ENST00000511083 675 ntBASIC5.03□□□□□ -1.6
VSX2P58304 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.03□□□□□ -1.6
VSX2P58304 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.03□□□□□ -1.6
VSX2P58304 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms