Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CLDN20P56880 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN20P56880 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN20P56880 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN20P56880 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN20P56880 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN20P56880 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 AC006484.1-201ENST00000435086 1884 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLDN20P56880 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLDN20P56880 MIR130A-201ENST00000385274 89 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 RN7SKP286-201ENST00000410894 299 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 RMRPP5-201ENST00000411156 267 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 DPPA2P2-201ENST00000418220 897 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 UBE2D3P3-201ENST00000426992 425 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 CRIP1P1-201ENST00000427567 185 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.14□□□□□ -1.59
CLDN20P56880 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 SNRPFP2-201ENST00000440710 251 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 CYCSP51-201ENST00000443545 318 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 EEF1B2P6-201ENST00000445713 673 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 RPSAP39-201ENST00000467439 883 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 AC073610.1-201ENST00000489971 396 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 DUTP1-201ENST00000493631 470 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 AC021087.2-201ENST00000504656 1203 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 AC074255.1-201ENST00000511259 501 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 AC012146.2-201ENST00000576545 416 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN20P56880 BMS1P7-201ENST00000602440 1052 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 AL513327.3-201ENST00000602618 469 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 ABI1P1-201ENST00000603375 1120 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 AL391834.1-201ENST00000609609 560 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 RNA5SP440-201ENST00000612665 119 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 OR5AC4P-202ENST00000642086 985 ntBASIC5.14□□□□□ -1.59
CLDN20P56880 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN20P56880 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN20P56880 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CLDN20P56880 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 RNA5SP46-201ENST00000362370 120 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 RNA5SP91-201ENST00000390902 119 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AL512422.1-201ENST00000407033 553 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AL355143.1-201ENST00000407101 841 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 OR2AT2P-201ENST00000413438 905 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 SDHDP6-201ENST00000414693 480 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 HYALP1-201ENST00000417674 1279 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 AC009784.1-201ENST00000426484 460 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms