Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH11P55287 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH11P55287 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDH11P55287 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 RNU6-40P-201ENST00000384254 107 ntBASIC5.06□□□□□ -1.6
CDH11P55287 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.06□□□□□ -1.6
CDH11P55287 HYALP1-201ENST00000417674 1279 ntBASIC5.06□□□□□ -1.6
CDH11P55287 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 AC127526.2-201ENST00000426436 775 ntBASIC5.06□□□□□ -1.6
CDH11P55287 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH11P55287 ARL5AP3-201ENST00000439327 386 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 IGBP1P3-201ENST00000447449 1000 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AC023141.9-201ENST00000458734 412 ntBASIC5.06□□□□□ -1.6
CDH11P55287 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH11P55287 AL136038.1-201ENST00000497246 351 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AK4P6-201ENST00000505168 528 ntBASIC5.06□□□□□ -1.6
CDH11P55287 PCNAP1-201ENST00000505363 709 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 AC108157.1-201ENST00000510511 539 ntBASIC5.06□□□□□ -1.6
CDH11P55287 RPL7L1P4-201ENST00000513004 707 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AC112206.4-201ENST00000515142 405 ntBASIC5.06□□□□□ -1.6
CDH11P55287 RN7SKP253-201ENST00000516424 309 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AC079064.1-201ENST00000528365 362 ntBASIC5.06□□□□□ -1.6
CDH11P55287 OR5AM1P-201ENST00000532136 1032 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 AC092868.3-201ENST00000560515 784 ntBASIC5.06□□□□□ -1.6
CDH11P55287 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 AP003499.2-201ENST00000624100 483 ntBASIC5.06□□□□□ -1.6
CDH11P55287 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH11P55287 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH11P55287 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CDH11P55287 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH11P55287 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CDH11P55287 AL022322.2-201ENST00000624072 20397 ntBASIC5.06□□□□□ -1.6
CDH11P55287 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH11P55287 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.06□□□□□ -1.6
CDH11P55287 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH11P55287 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CDH11P55287 AC144833.1-201ENST00000567953 4089 ntBASIC5.06□□□□□ -1.6
CDH11P55287 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH11P55287 DDX6P1-205ENST00000441966 1436 ntBASIC5.06□□□□□ -1.6
CDH11P55287 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 AL359715.3-201ENST00000569267 2123 ntBASIC5.05□□□□□ -1.6
CDH11P55287 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH11P55287 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH11P55287 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 EI24P3-201ENST00000399046 1062 ntBASIC5.05□□□□□ -1.6
CDH11P55287 HMGB1P20-201ENST00000402555 677 ntBASIC5.05□□□□□ -1.6
CDH11P55287 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH11P55287 MRPL53P1-201ENST00000414323 319 ntBASIC5.05□□□□□ -1.6
CDH11P55287 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH11P55287 AC093155.2-201ENST00000420734 937 ntBASIC5.05□□□□□ -1.6
CDH11P55287 RIMKLBP2-201ENST00000424737 654 ntBASIC5.05□□□□□ -1.6
CDH11P55287 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 SUMO2P3-201ENST00000438311 288 ntBASIC5.05□□□□□ -1.6
CDH11P55287 AL161722.1-201ENST00000446972 1032 ntBASIC5.05□□□□□ -1.6
CDH11P55287 VN1R48P-201ENST00000448149 1036 ntBASIC5.05□□□□□ -1.6
CDH11P55287 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 AC022215.1-201ENST00000481770 362 ntBASIC5.05□□□□□ -1.6
CDH11P55287 RN7SL570P-201ENST00000484405 292 ntBASIC5.05□□□□□ -1.6
CDH11P55287 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH11P55287 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH11P55287 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH11P55287 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH11P55287 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH11P55287 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH11P55287 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH11P55287 AC022404.1-201ENST00000555320 273 ntBASIC5.05□□□□□ -1.6
CDH11P55287 AC122134.1-202ENST00000569111 1201 ntBASIC5.05□□□□□ -1.6
CDH11P55287 SNORD95-201ENST00000579879 68 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms