Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH4P55283 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH4P55283 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 AC007068.1-201ENST00000396690 844 ntBASIC5.39□□□□□ -1.55
CDH4P55283 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 RN7SKP273-201ENST00000411392 314 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AL356968.2-201ENST00000412769 1257 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC090018.1-201ENST00000434369 367 ntBASIC5.39□□□□□ -1.55
CDH4P55283 EEF1B2P5-201ENST00000444820 548 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC090804.1-201ENST00000448870 490 ntBASIC5.39□□□□□ -1.55
CDH4P55283 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 AC005532.2-201ENST00000467154 373 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC093763.2-201ENST00000505334 1223 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH4P55283 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH4P55283 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.39□□□□□ -1.55
CDH4P55283 RNU6-943P-201ENST00000516960 98 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CDH4P55283 OR4A46P-201ENST00000527255 933 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC134349.2-201ENST00000535136 910 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH4P55283 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CDH4P55283 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 AC008814.1-201ENST00000603797 406 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AL121612.2-201ENST00000612261 482 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 AC009950.2-201ENST00000636548 183 ntBASIC5.39□□□□□ -1.55
CDH4P55283 AC135068.12-201ENST00000637370 931 ntBASIC5.39□□□□□ -1.55
CDH4P55283 SAMMSON-227ENST00000642114 1199 ntBASIC5.39□□□□□ -1.55
CDH4P55283 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH4P55283 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH4P55283 AC023421.1-201ENST00000590535 1785 ntBASIC5.39□□□□□ -1.55
CDH4P55283 MAPK10-338ENST00000641647 3362 ntBASIC5.39□□□□□ -1.55
CDH4P55283 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CDH4P55283 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CDH4P55283 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH4P55283 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH4P55283 AC011503.2-201ENST00000594230 1500 ntBASIC5.38□□□□□ -1.55
CDH4P55283 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CDH4P55283 AC019072.1-201ENST00000604535 1551 ntBASIC5.38□□□□□ -1.55
CDH4P55283 CASC19-260ENST00000641828 2001 ntBASIC5.38□□□□□ -1.55
CDH4P55283 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 AC093909.5-201ENST00000621839 1799 ntBASIC5.38□□□□□ -1.55
CDH4P55283 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 RNA5SP90-201ENST00000364801 99 ntBASIC5.38□□□□□ -1.55
CDH4P55283 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 MIR600-201ENST00000385007 98 ntBASIC5.38□□□□□ -1.55
CDH4P55283 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH4P55283 RPS4XP16-201ENST00000427198 791 ntBASIC5.38□□□□□ -1.55
CDH4P55283 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 RPL19P16-201ENST00000433839 588 ntBASIC5.38□□□□□ -1.55
CDH4P55283 RPS29P10-201ENST00000439197 166 ntBASIC5.38□□□□□ -1.55
CDH4P55283 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH4P55283 NOP56P2-201ENST00000447491 769 ntBASIC5.38□□□□□ -1.55
CDH4P55283 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH4P55283 AC009127.1-201ENST00000467090 155 ntBASIC5.38□□□□□ -1.55
CDH4P55283 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH4P55283 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH4P55283 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH4P55283 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH4P55283 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.38□□□□□ -1.55
CDH4P55283 NPM1P45-201ENST00000583151 559 ntBASIC5.38□□□□□ -1.55
CDH4P55283 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH4P55283 AL139407.1-201ENST00000613826 1175 ntBASIC5.38□□□□□ -1.55
CDH4P55283 AL356752.1-201ENST00000615844 593 ntBASIC5.38□□□□□ -1.55
CDH4P55283 OR8G7P-201ENST00000616658 848 ntBASIC5.38□□□□□ -1.55
CDH4P55283 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH4P55283 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CDH4P55283 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH4P55283 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms