Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VCPP55072 VDAC2P4-201ENST00000452925 711 ntBASIC5.84□□□□□ -1.47
VCPP55072 AC109462.1-201ENST00000491087 368 ntBASIC5.84□□□□□ -1.47
VCPP55072 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.84□□□□□ -1.47
VCPP55072 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.84□□□□□ -1.47
VCPP55072 RN7SKP253-201ENST00000516424 309 ntBASIC5.84□□□□□ -1.47
VCPP55072 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.84□□□□□ -1.47
VCPP55072 AC122688.1-201ENST00000541494 223 ntBASIC5.84□□□□□ -1.47
VCPP55072 AC019322.1-201ENST00000571869 389 ntBASIC5.84□□□□□ -1.47
VCPP55072 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.84□□□□□ -1.47
VCPP55072 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.84□□□□□ -1.47
VCPP55072 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.84□□□□□ -1.47
VCPP55072 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.84□□□□□ -1.47
VCPP55072 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.84□□□□□ -1.47
VCPP55072 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.84□□□□□ -1.47
VCPP55072 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
VCPP55072 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VCPP55072 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.84□□□□□ -1.47
VCPP55072 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
VCPP55072 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.84□□□□□ -1.47
VCPP55072 ZNF733P-202ENST00000444809 1573 ntBASIC5.84□□□□□ -1.48
VCPP55072 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VCPP55072 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
VCPP55072 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VCPP55072 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VCPP55072 AC011503.2-201ENST00000594230 1500 ntBASIC5.84□□□□□ -1.48
VCPP55072 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
VCPP55072 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
VCPP55072 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VCPP55072 AC068870.1-201ENST00000563737 2455 ntBASIC5.83□□□□□ -1.48
VCPP55072 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.83□□□□□ -1.48
VCPP55072 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VCPP55072 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VCPP55072 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VCPP55072 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VCPP55072 SNORA70.6-201ENST00000383934 134 ntBASIC5.83□□□□□ -1.48
VCPP55072 GAPDHP42-201ENST00000406848 981 ntBASIC5.83□□□□□ -1.48
VCPP55072 AL133482.1-201ENST00000415988 498 ntBASIC5.83□□□□□ -1.48
VCPP55072 AL133325.1-201ENST00000421090 382 ntBASIC5.83□□□□□ -1.48
VCPP55072 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.83□□□□□ -1.48
VCPP55072 BX119904.3-201ENST00000428194 957 ntBASIC5.83□□□□□ -1.48
VCPP55072 NANOGP9-201ENST00000439890 892 ntBASIC5.83□□□□□ -1.48
VCPP55072 AC104849.1-201ENST00000462623 405 ntBASIC5.83□□□□□ -1.48
VCPP55072 DEFB109A-201ENST00000482450 265 ntBASIC5.83□□□□□ -1.48
VCPP55072 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.83□□□□□ -1.48
VCPP55072 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.83□□□□□ -1.48
VCPP55072 AC111000.5-201ENST00000506559 1178 ntBASIC5.83□□□□□ -1.48
VCPP55072 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.83□□□□□ -1.48
VCPP55072 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.83□□□□□ -1.48
VCPP55072 IGLV3-24-201ENST00000517477 197 ntBASIC5.83□□□□□ -1.48
VCPP55072 BRD9P1-201ENST00000529855 560 ntBASIC5.83□□□□□ -1.48
VCPP55072 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.83□□□□□ -1.48
VCPP55072 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.83□□□□□ -1.48
VCPP55072 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.83□□□□□ -1.48
VCPP55072 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.83□□□□□ -1.48
VCPP55072 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.83□□□□□ -1.48
VCPP55072 MIR3934-201ENST00000579806 107 ntBASIC5.83□□□□□ -1.48
VCPP55072 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.83□□□□□ -1.48
VCPP55072 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.83□□□□□ -1.48
VCPP55072 TAS2R6P-201ENST00000605022 826 ntBASIC5.83□□□□□ -1.48
VCPP55072 PPATP2-201ENST00000605635 508 ntBASIC5.83□□□□□ -1.48
VCPP55072 AL139124.1-201ENST00000609123 421 ntBASIC5.83□□□□□ -1.48
VCPP55072 AC245389.2-201ENST00000616023 576 ntBASIC5.83□□□□□ -1.48
VCPP55072 OR8G7P-201ENST00000616658 848 ntBASIC5.83□□□□□ -1.48
VCPP55072 AC242843.1-201ENST00000618702 573 ntBASIC5.83□□□□□ -1.48
VCPP55072 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.83□□□□□ -1.48
VCPP55072 AC009950.2-201ENST00000636548 183 ntBASIC5.83□□□□□ -1.48
VCPP55072 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VCPP55072 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VCPP55072 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VCPP55072 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
VCPP55072 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.82□□□□□ -1.48
VCPP55072 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 U3.28-201ENST00000391249 210 ntBASIC5.82□□□□□ -1.48
VCPP55072 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 SMC4P1-201ENST00000414479 527 ntBASIC5.82□□□□□ -1.48
VCPP55072 AC093162.1-201ENST00000419682 124 ntBASIC5.82□□□□□ -1.48
VCPP55072 AC245028.1-201ENST00000423259 256 ntBASIC5.82□□□□□ -1.48
VCPP55072 AC104837.2-201ENST00000427236 424 ntBASIC5.82□□□□□ -1.48
VCPP55072 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.82□□□□□ -1.48
VCPP55072 AL359265.1-201ENST00000440296 795 ntBASIC5.82□□□□□ -1.48
VCPP55072 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.82□□□□□ -1.48
VCPP55072 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.82□□□□□ -1.48
VCPP55072 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.82□□□□□ -1.48
VCPP55072 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 RPL5P22-201ENST00000480199 884 ntBASIC5.82□□□□□ -1.48
VCPP55072 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 RN7SL205P-201ENST00000490174 284 ntBASIC5.82□□□□□ -1.48
VCPP55072 RPEP1-201ENST00000504507 658 ntBASIC5.82□□□□□ -1.48
VCPP55072 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.82□□□□□ -1.48
VCPP55072 RAB9BP1-201ENST00000519581 626 ntBASIC5.82□□□□□ -1.48
VCPP55072 KCTD9P6-201ENST00000522306 950 ntBASIC5.82□□□□□ -1.48
VCPP55072 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.82□□□□□ -1.48
VCPP55072 BNIP3P1-201ENST00000547295 580 ntBASIC5.82□□□□□ -1.48
VCPP55072 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.82□□□□□ -1.48
VCPP55072 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms