Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COPB1P53618 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COPB1P53618 AL078621.3-201ENST00000623707 2042 ntBASIC6.03□□□□□ -1.44
COPB1P53618 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COPB1P53618 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
COPB1P53618 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.02□□□□□ -1.45
COPB1P53618 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
COPB1P53618 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 AL442128.2-201ENST00000620246 1824 ntBASIC6.02□□□□□ -1.45
COPB1P53618 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.02□□□□□ -1.45
COPB1P53618 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.02□□□□□ -1.45
COPB1P53618 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 RNA5SP510-201ENST00000364697 99 ntBASIC6.02□□□□□ -1.45
COPB1P53618 RNA5SP131-201ENST00000365452 119 ntBASIC6.02□□□□□ -1.45
COPB1P53618 MIR122-201ENST00000385044 85 ntBASIC6.02□□□□□ -1.45
COPB1P53618 NPM1P37-201ENST00000403105 874 ntBASIC6.02□□□□□ -1.45
COPB1P53618 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.02□□□□□ -1.45
COPB1P53618 RMRPP5-201ENST00000411156 267 ntBASIC6.02□□□□□ -1.45
COPB1P53618 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.02□□□□□ -1.45
COPB1P53618 AL121882.1-201ENST00000422893 417 ntBASIC6.02□□□□□ -1.45
COPB1P53618 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 AC011242.1-201ENST00000433596 1158 ntBASIC6.02□□□□□ -1.45
COPB1P53618 Z80107.1-201ENST00000436830 412 ntBASIC6.02□□□□□ -1.45
COPB1P53618 MTND1P26-201ENST00000440488 538 ntBASIC6.02□□□□□ -1.45
COPB1P53618 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.02□□□□□ -1.45
COPB1P53618 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.02□□□□□ -1.45
COPB1P53618 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 SETP20-201ENST00000457046 852 ntBASIC6.02□□□□□ -1.45
COPB1P53618 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.02□□□□□ -1.45
COPB1P53618 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.02□□□□□ -1.45
COPB1P53618 HMGN1P9-201ENST00000515212 298 ntBASIC6.02□□□□□ -1.45
COPB1P53618 IGKV3D-34-201ENST00000522638 302 ntBASIC6.02□□□□□ -1.45
COPB1P53618 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.02□□□□□ -1.45
COPB1P53618 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.02□□□□□ -1.45
COPB1P53618 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.02□□□□□ -1.45
COPB1P53618 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.02□□□□□ -1.45
COPB1P53618 MIR4433B-201ENST00000581329 102 ntBASIC6.02□□□□□ -1.45
COPB1P53618 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.02□□□□□ -1.45
COPB1P53618 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.02□□□□□ -1.45
COPB1P53618 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.02□□□□□ -1.45
COPB1P53618 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.02□□□□□ -1.45
COPB1P53618 AP003499.2-201ENST00000624100 483 ntBASIC6.02□□□□□ -1.45
COPB1P53618 AL390318.1-201ENST00000624564 687 ntBASIC6.02□□□□□ -1.45
COPB1P53618 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.02□□□□□ -1.45
COPB1P53618 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COPB1P53618 AP000473.2-201ENST00000602659 1537 ntBASIC6.02□□□□□ -1.45
COPB1P53618 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
COPB1P53618 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COPB1P53618 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 MAPK10-328ENST00000641553 4009 ntBASIC6.02□□□□□ -1.45
COPB1P53618 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 NEPNP-201ENST00000404786 1371 ntBASIC6.02□□□□□ -1.45
COPB1P53618 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 AP001284.1-201ENST00000528393 2118 ntBASIC6.02□□□□□ -1.45
COPB1P53618 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COPB1P53618 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COPB1P53618 GVINP1-202ENST00000531871 7271 ntBASIC6.02□□□□□ -1.45
COPB1P53618 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.02□□□□□ -1.45
COPB1P53618 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 AC092376.2-201ENST00000622621 4116 ntBASIC6.01□□□□□ -1.45
COPB1P53618 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 OR13Z1P-201ENST00000416141 834 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AC096644.3-201ENST00000416788 338 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.01□□□□□ -1.45
COPB1P53618 RPS3P2-201ENST00000421346 701 ntBASIC6.01□□□□□ -1.45
COPB1P53618 MTND4P24-201ENST00000424002 397 ntBASIC6.01□□□□□ -1.45
COPB1P53618 RPL7AP49-201ENST00000429522 581 ntBASIC6.01□□□□□ -1.45
COPB1P53618 MRPL50P1-201ENST00000431951 384 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AL591438.1-201ENST00000433508 581 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.01□□□□□ -1.45
COPB1P53618 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 XKRY2-201ENST00000442362 1093 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 RPS3AP53-201ENST00000454716 778 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 AC084754.1-201ENST00000463466 464 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AC090589.1-201ENST00000473109 362 ntBASIC6.01□□□□□ -1.45
COPB1P53618 RN7SL214P-201ENST00000487317 265 ntBASIC6.01□□□□□ -1.45
COPB1P53618 RPL23AP73-201ENST00000492507 471 ntBASIC6.01□□□□□ -1.45
COPB1P53618 MTCO2P9-201ENST00000503214 694 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms