Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCNKAP51800 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
CLCNKAP51800 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CLCNKAP51800 CR788268.1-201ENST00000603931 1809 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCNKAP51800 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLCNKAP51800 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CLCNKAP51800 RNA5SP453-201ENST00000362503 119 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RNU6-249P-201ENST00000363016 102 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RNU6-697P-201ENST00000363348 107 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RNA5SP234-201ENST00000363916 119 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCNKAP51800 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCNKAP51800 Z93019.1-201ENST00000416450 973 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RAB9AP5-201ENST00000437794 597 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RAB9AP2-201ENST00000443911 597 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCNKAP51800 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
CLCNKAP51800 RANP1-206ENST00000455094 651 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 MTND2P30-201ENST00000456663 382 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 AL133445.1-201ENST00000467051 452 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 AC015908.1-201ENST00000478739 476 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 SIAH1P1-201ENST00000479411 923 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCNKAP51800 RPS17P5-201ENST00000498293 408 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 AC106806.2-201ENST00000509365 500 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCNKAP51800 RN7SKP34-201ENST00000516142 244 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 RN7SKP99-201ENST00000517028 307 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCNKAP51800 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCNKAP51800 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCNKAP51800 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCNKAP51800 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CLCNKAP51800 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCNKAP51800 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCNKAP51800 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCNKAP51800 AL118522.2-201ENST00000616045 615 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 AC006840.1-201ENST00000623069 542 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCNKAP51800 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCNKAP51800 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCNKAP51800 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CLCNKAP51800 OR4F13P-202ENST00000560066 2054 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCNKAP51800 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCNKAP51800 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCNKAP51800 AC083899.1-201ENST00000454465 3819 ntBASIC5.44□□□□□ -1.54
CLCNKAP51800 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.44□□□□□ -1.54
CLCNKAP51800 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCNKAP51800 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCNKAP51800 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLCNKAP51800 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLCNKAP51800 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCNKAP51800 VN1R31P-201ENST00000417498 730 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 BX276092.6-201ENST00000430476 250 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCNKAP51800 BX276092.8-201ENST00000455722 250 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 AC011225.1-201ENST00000457751 369 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 RN7SL51P-201ENST00000468230 285 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCNKAP51800 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCNKAP51800 EIF3LP3-201ENST00000495197 822 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCNKAP51800 GAPDHP62-201ENST00000515313 990 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.43□□□□□ -1.54
CLCNKAP51800 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCNKAP51800 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCNKAP51800 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCNKAP51800 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCNKAP51800 AL671309.1-201ENST00000603750 544 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 SUGT1P3-202ENST00000604259 383 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 BNIP3P19-201ENST00000605397 577 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 AP000864.1-201ENST00000609424 650 ntBASIC5.43□□□□□ -1.54
CLCNKAP51800 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCNKAP51800 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCNKAP51800 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCNKAP51800 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CLCNKAP51800 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCNKAP51800 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLCNKAP51800 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms