Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA4P51532 CASC19-260ENST00000641828 2001 ntBASIC8.92□□□□□ -0.98
SMARCA4P51532 AC016831.4-201ENST00000438302 307 ntBASIC8.92□□□□□ -0.98
SMARCA4P51532 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.92□□□□□ -0.98
SMARCA4P51532 AC109327.1-201ENST00000471666 403 ntBASIC8.92□□□□□ -0.98
SMARCA4P51532 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.92□□□□□ -0.98
SMARCA4P51532 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.92□□□□□ -0.98
SMARCA4P51532 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC8.92□□□□□ -0.98
SMARCA4P51532 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.92□□□□□ -0.98
SMARCA4P51532 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.92□□□□□ -0.98
SMARCA4P51532 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.92□□□□□ -0.98
SMARCA4P51532 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.92□□□□□ -0.98
SMARCA4P51532 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA4P51532 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.92□□□□□ -0.98
SMARCA4P51532 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SMARCA4P51532 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA4P51532 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
SMARCA4P51532 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA4P51532 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA4P51532 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.92□□□□□ -0.98
SMARCA4P51532 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SMARCA4P51532 MTCO1P15-201ENST00000529569 1526 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
SMARCA4P51532 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
SMARCA4P51532 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC8.91□□□□□ -0.98
SMARCA4P51532 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.91□□□□□ -0.98
SMARCA4P51532 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
SMARCA4P51532 CYP4F29P-201ENST00000420685 446 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 MED28P3-201ENST00000444288 531 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.91□□□□□ -0.98
SMARCA4P51532 RN7SL802P-201ENST00000577858 299 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC8.91□□□□□ -0.98
SMARCA4P51532 AL022401.1-201ENST00000619498 108 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 FTO-223ENST00000640179 210 ntTSL 5 BASIC8.91□□□□□ -0.98
SMARCA4P51532 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
SMARCA4P51532 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 AC004076.2-201ENST00000620532 3323 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
SMARCA4P51532 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.91□□□□□ -0.98
SMARCA4P51532 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
SMARCA4P51532 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
SMARCA4P51532 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.91□□□□□ -0.98
SMARCA4P51532 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
SMARCA4P51532 RPL17P36-201ENST00000420302 549 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.91□□□□□ -0.98
SMARCA4P51532 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC8.91□□□□□ -0.98
SMARCA4P51532 AL691482.1-201ENST00000453255 87 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.91□□□□□ -0.98
SMARCA4P51532 AC067959.1-201ENST00000604334 379 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 AL139041.1-201ENST00000605480 610 ntBASIC8.91□□□□□ -0.98
SMARCA4P51532 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA4P51532 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA4P51532 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.9□□□□□ -0.98
SMARCA4P51532 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA4P51532 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA4P51532 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA4P51532 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.9□□□□□ -0.98
SMARCA4P51532 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
SMARCA4P51532 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA4P51532 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA4P51532 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA4P51532 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SMARCA4P51532 SNORA70.10-201ENST00000384515 134 ntBASIC8.9□□□□□ -0.99
SMARCA4P51532 TBCAP2-201ENST00000416175 326 ntBASIC8.9□□□□□ -0.99
SMARCA4P51532 NPM1P33-201ENST00000438918 872 ntBASIC8.9□□□□□ -0.99
SMARCA4P51532 HMGB1P4-201ENST00000455362 567 ntBASIC8.9□□□□□ -0.99
SMARCA4P51532 CDV3-208ENST00000511392 554 ntTSL 5 BASIC8.9□□□□□ -0.99
SMARCA4P51532 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.9□□□□□ -0.99
SMARCA4P51532 AC087821.1-201ENST00000623639 567 ntBASIC8.9□□□□□ -0.99
SMARCA4P51532 LINC02035-201ENST00000610128 5476 ntBASIC8.9□□□□□ -0.99
SMARCA4P51532 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.89□□□□□ -0.99
SMARCA4P51532 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SMARCA4P51532 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.89□□□□□ -0.99
SMARCA4P51532 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.89□□□□□ -0.99
SMARCA4P51532 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
SMARCA4P51532 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SMARCA4P51532 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 ARL2BPP10-201ENST00000446487 531 ntBASIC8.89□□□□□ -0.99
SMARCA4P51532 RPS5P7-201ENST00000456664 608 ntBASIC8.89□□□□□ -0.99
SMARCA4P51532 AC104971.1-201ENST00000495117 578 ntBASIC8.89□□□□□ -0.99
SMARCA4P51532 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.89□□□□□ -0.99
SMARCA4P51532 AL109766.1-201ENST00000555080 552 ntBASIC8.89□□□□□ -0.99
SMARCA4P51532 AC115286.1-201ENST00000604298 434 ntBASIC8.89□□□□□ -0.99
SMARCA4P51532 AC092653.1-201ENST00000608509 531 ntBASIC8.89□□□□□ -0.99
SMARCA4P51532 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms