Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CR1P49238 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CR1P49238 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CR1P49238 RN7SKP74-201ENST00000362849 309 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 AC007618.1-201ENST00000366455 732 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC211486.3-201ENST00000412694 621 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 SDHDP6-201ENST00000414693 480 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CR1P49238 MTND6P12-201ENST00000428247 522 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 OR6C71P-201ENST00000432580 913 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 AC073109.1-201ENST00000445066 978 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 AC073909.1-201ENST00000447112 999 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CR1P49238 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CR1P49238 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC018442.3-201ENST00000523025 183 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC006349.1-201ENST00000555526 235 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC015720.2-201ENST00000567709 334 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 NDUFA5P11-201ENST00000567995 343 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 PRPF19P1-201ENST00000584766 898 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 AC060766.1-201ENST00000590824 627 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CR1P49238 AL137246.1-201ENST00000607072 977 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CR1P49238 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CX3CR1P49238 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC025574.1-201ENST00000554784 1653 ntBASIC4.66□□□□□ -1.66
CX3CR1P49238 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CR1P49238 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CR1P49238 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.65□□□□□ -1.66
CX3CR1P49238 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CR1P49238 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.65□□□□□ -1.66
CX3CR1P49238 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CR1P49238 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.65□□□□□ -1.66
CX3CR1P49238 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CR1P49238 AL450345.1-202ENST00000605741 3881 ntBASIC4.65□□□□□ -1.66
CX3CR1P49238 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CX3CR1P49238 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CR1P49238 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.65□□□□□ -1.66
CX3CR1P49238 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CR1P49238 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.65□□□□□ -1.66
CX3CR1P49238 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 OR13C3-201ENST00000374781 1108 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 RAB5CP1-201ENST00000395972 580 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AL133388.1-201ENST00000404509 287 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 MTCO3P17-201ENST00000443775 513 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 HMGN1P36-201ENST00000446623 298 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 GAPDHP25-201ENST00000447061 1001 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 YWHAEP1-201ENST00000453697 763 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AL035090.1-201ENST00000454835 332 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AC245028.2-201ENST00000458673 253 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AC107015.1-201ENST00000466902 747 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 CBX1P5-201ENST00000475330 559 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 RPL7P41-201ENST00000485823 957 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 RN7SL423P-201ENST00000486202 304 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CR1P49238 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AC090638.1-201ENST00000498296 909 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CR1P49238 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AC074087.1-201ENST00000512059 724 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.65□□□□□ -1.67
CX3CR1P49238 EIF3KP3-201ENST00000514461 639 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CR1P49238 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 MIR1273E-201ENST00000581165 102 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 FO393422.1-201ENST00000603908 708 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms