Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.15□□□□□ -1.58
SOX2P48431 AL161912.4-201ENST00000623889 2468 ntBASIC5.15□□□□□ -1.58
SOX2P48431 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.15□□□□□ -1.58
SOX2P48431 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SOX2P48431 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.15□□□□□ -1.58
SOX2P48431 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SOX2P48431 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX2P48431 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX2P48431 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SOX2P48431 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SOX2P48431 RNU4-68P-201ENST00000364314 141 ntBASIC5.15□□□□□ -1.59
SOX2P48431 MIR142-201ENST00000384835 87 ntBASIC5.15□□□□□ -1.59
SOX2P48431 RNU6-932P-201ENST00000391108 106 ntBASIC5.15□□□□□ -1.59
SOX2P48431 RPL11P3-201ENST00000395256 523 ntBASIC5.15□□□□□ -1.59
SOX2P48431 ARSFP1-201ENST00000398758 477 ntBASIC5.15□□□□□ -1.59
SOX2P48431 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 MTND4P13-201ENST00000402078 1023 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AL021331.1-201ENST00000402817 582 ntBASIC5.15□□□□□ -1.59
SOX2P48431 PRELID1P1-201ENST00000403549 660 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC010385.1-201ENST00000412374 256 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AL590806.1-201ENST00000415818 853 ntBASIC5.15□□□□□ -1.59
SOX2P48431 RPS24P7-201ENST00000416921 246 ntBASIC5.15□□□□□ -1.59
SOX2P48431 MTND4P3-201ENST00000417829 541 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX2P48431 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 HSPE1P16-201ENST00000426640 348 ntBASIC5.15□□□□□ -1.59
SOX2P48431 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SOX2P48431 AC099670.2-201ENST00000435130 321 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC242426.1-201ENST00000435270 960 ntBASIC5.15□□□□□ -1.59
SOX2P48431 HSFY3P-201ENST00000444242 1191 ntBASIC5.15□□□□□ -1.59
SOX2P48431 MTND2P22-201ENST00000444325 1033 ntBASIC5.15□□□□□ -1.59
SOX2P48431 Z83846.1-201ENST00000446798 265 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC093166.3-201ENST00000448785 303 ntBASIC5.15□□□□□ -1.59
SOX2P48431 PDCL3P4-201ENST00000489621 720 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 AC097486.1-201ENST00000515331 210 ntBASIC5.15□□□□□ -1.59
SOX2P48431 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.15□□□□□ -1.59
SOX2P48431 AC104417.1-201ENST00000523974 751 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX2P48431 OR8I1P-201ENST00000529291 931 ntBASIC5.15□□□□□ -1.59
SOX2P48431 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.15□□□□□ -1.59
SOX2P48431 AC091515.1-201ENST00000548110 679 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC008126.1-201ENST00000549019 480 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 ZNF322P1-201ENST00000568013 1209 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 SNORD39.2-201ENST00000579995 76 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX2P48431 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX2P48431 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.15□□□□□ -1.59
SOX2P48431 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.15□□□□□ -1.59
SOX2P48431 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.15□□□□□ -1.59
SOX2P48431 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX2P48431 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX2P48431 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX2P48431 AC092954.1-201ENST00000609121 445 ntBASIC5.15□□□□□ -1.59
SOX2P48431 MIR6070-201ENST00000613967 103 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC108359.1-201ENST00000616451 1211 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC096708.4-201ENST00000620563 552 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AC010435.1-201ENST00000623353 1177 ntBASIC5.15□□□□□ -1.59
SOX2P48431 AL357140.4-201ENST00000636827 412 ntBASIC5.15□□□□□ -1.59
SOX2P48431 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
SOX2P48431 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX2P48431 AL355488.2-201ENST00000609909 2850 ntBASIC5.15□□□□□ -1.59
SOX2P48431 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SOX2P48431 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.15□□□□□ -1.59
SOX2P48431 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.15□□□□□ -1.59
SOX2P48431 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX2P48431 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SOX2P48431 AC109446.4-201ENST00000623235 2755 ntBASIC5.15□□□□□ -1.59
SOX2P48431 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SOX2P48431 AC104964.3-201ENST00000606115 2860 ntBASIC5.14□□□□□ -1.59
SOX2P48431 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.14□□□□□ -1.59
SOX2P48431 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.14□□□□□ -1.59
SOX2P48431 SNORA64.3-201ENST00000365647 134 ntBASIC5.14□□□□□ -1.59
SOX2P48431 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.14□□□□□ -1.59
SOX2P48431 RNU4-31P-201ENST00000384211 141 ntBASIC5.14□□□□□ -1.59
SOX2P48431 MT-TP-201ENST00000387461 68 ntBASIC5.14□□□□□ -1.59
SOX2P48431 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 AL049545.1-201ENST00000401856 572 ntBASIC5.14□□□□□ -1.59
SOX2P48431 ZNF37CP-201ENST00000406795 241 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC092638.1-201ENST00000411966 1275 ntBASIC5.14□□□□□ -1.59
SOX2P48431 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.14□□□□□ -1.59
SOX2P48431 MTCO3P4-201ENST00000419236 787 ntBASIC5.14□□□□□ -1.59
SOX2P48431 RPS4XP16-201ENST00000427198 791 ntBASIC5.14□□□□□ -1.59
SOX2P48431 FO393419.3-201ENST00000428741 282 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms