Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NKX2-1P43699 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 SELENOWP1-201ENST00000322792 252 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 RNA5SP326-201ENST00000363209 110 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 RNU6-252P-201ENST00000363232 107 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 RN7SKP146-201ENST00000410242 334 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 RNU2-18P-201ENST00000411224 162 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC002524.1-201ENST00000411687 547 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 OR51A6P-201ENST00000418680 1004 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 GAPDHP34-201ENST00000432112 823 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 RPL12P49-201ENST00000441100 121 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC092106.1-201ENST00000444291 373 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC096741.1-201ENST00000472250 846 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC099521.1-201ENST00000482557 334 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.62□□□□□ -1.67
NKX2-1P43699 RPL12P30-201ENST00000488389 499 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 COX6B1P2-201ENST00000489624 230 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 RN7SL205P-201ENST00000490174 284 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC112198.4-201ENST00000515450 351 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 MTND1P6-201ENST00000523621 946 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 EIF4A2P5-201ENST00000529914 499 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX2-1P43699 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX2-1P43699 SS18L2P2-201ENST00000583960 235 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC008507.3-201ENST00000585753 472 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 MTATP6P2-201ENST00000603319 678 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC012368.3-201ENST00000604190 219 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC012557.1-201ENST00000607115 611 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC005156.1-201ENST00000613371 573 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC024023.1-201ENST00000624530 922 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-1P43699 OR11H2-202ENST00000641517 1085 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC104623.2-202ENST00000623477 4002 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.62□□□□□ -1.67
NKX2-1P43699 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 AC006484.1-201ENST00000435086 1884 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 AC083899.1-201ENST00000454465 3819 ntBASIC4.62□□□□□ -1.67
NKX2-1P43699 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-1P43699 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NKX2-1P43699 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NKX2-1P43699 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms