Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.71□□□□□ -1.5
CTNNA1P35221 AC005297.1-201ENST00000444765 862 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AL157385.1-201ENST00000446973 268 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.71□□□□□ -1.5
CTNNA1P35221 AL591623.2-201ENST00000449978 222 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AL450023.1-201ENST00000450868 751 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 RPL10P17-201ENST00000453852 316 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CTNNA1P35221 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.71□□□□□ -1.5
CTNNA1P35221 AC011476.1-201ENST00000466725 307 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AC096741.1-201ENST00000472250 846 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.71□□□□□ -1.5
CTNNA1P35221 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.71□□□□□ -1.5
CTNNA1P35221 AL671862.1-201ENST00000515851 349 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.71□□□□□ -1.5
CTNNA1P35221 AC092868.3-201ENST00000560515 784 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.71□□□□□ -1.5
CTNNA1P35221 MTCYBP13-201ENST00000578634 1093 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AP005403.1-201ENST00000579720 229 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.71□□□□□ -1.5
CTNNA1P35221 AL137072.1-201ENST00000603444 466 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 PPATP2-201ENST00000605635 508 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AC244107.2-201ENST00000611773 76 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 AC073593.1-201ENST00000624500 411 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.71□□□□□ -1.5
CTNNA1P35221 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.71□□□□□ -1.5
CTNNA1P35221 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.71□□□□□ -1.5
CTNNA1P35221 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.71□□□□□ -1.5
CTNNA1P35221 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTNNA1P35221 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.71□□□□□ -1.5
CTNNA1P35221 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.71□□□□□ -1.5
CTNNA1P35221 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTNNA1P35221 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTNNA1P35221 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.71□□□□□ -1.5
CTNNA1P35221 CASC19-284ENST00000642142 1868 ntBASIC5.71□□□□□ -1.5
CTNNA1P35221 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTNNA1P35221 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CTNNA1P35221 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CTNNA1P35221 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CTNNA1P35221 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CTNNA1P35221 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.7□□□□□ -1.5
CTNNA1P35221 GAPDHP42-201ENST00000406848 981 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AKR1B10P1-201ENST00000425765 942 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.7□□□□□ -1.5
CTNNA1P35221 RPL19P16-201ENST00000433839 588 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.7□□□□□ -1.5
CTNNA1P35221 AL035090.1-201ENST00000454835 332 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.7□□□□□ -1.5
CTNNA1P35221 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CTNNA1P35221 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.7□□□□□ -1.5
CTNNA1P35221 MYL12BP2-201ENST00000503948 512 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AC016559.2-201ENST00000510759 359 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AC109464.1-201ENST00000511091 819 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.7□□□□□ -1.5
CTNNA1P35221 AC104997.1-201ENST00000519761 717 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.7□□□□□ -1.5
CTNNA1P35221 NPM1P35-201ENST00000533043 868 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.7□□□□□ -1.5
CTNNA1P35221 IGBP1P1-201ENST00000554337 1009 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.7□□□□□ -1.5
CTNNA1P35221 AP005431.1-201ENST00000618479 319 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AP002967.1-201ENST00000624203 539 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AC019080.5-201ENST00000624891 757 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CTNNA1P35221 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.7□□□□□ -1.5
CTNNA1P35221 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CTNNA1P35221 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTNNA1P35221 AC104623.2-202ENST00000623477 4002 ntBASIC5.7□□□□□ -1.5
CTNNA1P35221 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CTNNA1P35221 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CTNNA1P35221 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CTNNA1P35221 RNA5SP433-201ENST00000364491 114 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 RN7SKP6-201ENST00000364795 319 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 AC007618.1-201ENST00000366455 732 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms