Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A5P29400 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6□□□□□ -1.45
COL4A5P29400 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A5P29400 SNORD113.2-201ENST00000364166 89 ntBASIC6□□□□□ -1.45
COL4A5P29400 SNORA70.10-201ENST00000384515 134 ntBASIC6□□□□□ -1.45
COL4A5P29400 MIR298-201ENST00000401212 88 ntBASIC6□□□□□ -1.45
COL4A5P29400 AL136116.2-201ENST00000404020 785 ntBASIC6□□□□□ -1.45
COL4A5P29400 AL354868.1-201ENST00000417077 482 ntBASIC6□□□□□ -1.45
COL4A5P29400 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A5P29400 AL645608.4-201ENST00000423619 154 ntBASIC6□□□□□ -1.45
COL4A5P29400 RPL12P34-201ENST00000424532 479 ntBASIC6□□□□□ -1.45
COL4A5P29400 CBX1P1-201ENST00000440184 427 ntBASIC6□□□□□ -1.45
COL4A5P29400 RPL7AP52-201ENST00000458096 790 ntBASIC6□□□□□ -1.45
COL4A5P29400 AC007537.2-201ENST00000472093 511 ntBASIC6□□□□□ -1.45
COL4A5P29400 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6□□□□□ -1.45
COL4A5P29400 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6□□□□□ -1.45
COL4A5P29400 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6□□□□□ -1.45
COL4A5P29400 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6□□□□□ -1.45
COL4A5P29400 AP005119.2-201ENST00000579735 1105 ntBASIC6□□□□□ -1.45
COL4A5P29400 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A5P29400 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 uc_338.7-201ENST00000621834 124 ntBASIC6□□□□□ -1.45
COL4A5P29400 AC087821.1-201ENST00000623639 567 ntBASIC6□□□□□ -1.45
COL4A5P29400 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6□□□□□ -1.45
COL4A5P29400 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.99□□□□□ -1.45
COL4A5P29400 NCLP2-201ENST00000416078 1462 ntBASIC5.99□□□□□ -1.45
COL4A5P29400 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
COL4A5P29400 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL4A5P29400 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL4A5P29400 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A5P29400 CASC19-260ENST00000641828 2001 ntBASIC5.99□□□□□ -1.45
COL4A5P29400 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A5P29400 RN7SKP185-201ENST00000362813 326 ntBASIC5.99□□□□□ -1.45
COL4A5P29400 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A5P29400 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A5P29400 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A5P29400 AC122718.1-201ENST00000439448 744 ntBASIC5.99□□□□□ -1.45
COL4A5P29400 FAM133DP-201ENST00000464802 691 ntBASIC5.99□□□□□ -1.45
COL4A5P29400 AC116562.1-201ENST00000485355 781 ntBASIC5.99□□□□□ -1.45
COL4A5P29400 CYCSP29-201ENST00000533731 318 ntBASIC5.99□□□□□ -1.45
COL4A5P29400 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.99□□□□□ -1.45
COL4A5P29400 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A5P29400 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL4A5P29400 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A5P29400 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
COL4A5P29400 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL4A5P29400 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A5P29400 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 AC006065.1-201ENST00000422539 802 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 AL590399.2-201ENST00000427536 309 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 TXNP2-201ENST00000443918 295 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 RPS12P31-201ENST00000491419 398 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A5P29400 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 AC073091.2-201ENST00000603205 907 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A5P29400 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL4A5P29400 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A5P29400 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A5P29400 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A5P29400 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
COL4A5P29400 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 AC009779.8-201ENST00000641684 4384 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 AC138907.8-201ENST00000623981 2256 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL4A5P29400 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A5P29400 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A5P29400 TBCAP2-201ENST00000416175 326 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 AC017019.1-201ENST00000426129 261 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 ARL2BPP10-201ENST00000446487 531 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 RPS24P16-201ENST00000497294 392 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A5P29400 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.98□□□□□ -1.45
COL4A5P29400 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A5P29400 AL109766.1-201ENST00000555080 552 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A5P29400 AL356218.2-201ENST00000605264 187 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 AL356608.1-201ENST00000610034 820 ntBASIC5.98□□□□□ -1.45
COL4A5P29400 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms