Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC109583.2-201ENST00000617367 129 ntBASIC4.54□□□□□ -1.68
HLA-DMAP28067 AP003400.3-201ENST00000624904 346 ntBASIC4.54□□□□□ -1.68
HLA-DMAP28067 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMAP28067 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DMAP28067 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DMAP28067 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMAP28067 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMAP28067 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DMAP28067 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DMAP28067 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DMAP28067 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DMAP28067 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMAP28067 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMAP28067 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMAP28067 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMAP28067 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMAP28067 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 RNU6-1263P-201ENST00000384601 106 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 MIR551A-201ENST00000385042 96 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AP000580.1-201ENST00000404439 358 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 TMBIM7P-201ENST00000418074 855 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AL139158.1-201ENST00000424719 340 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AL022331.1-201ENST00000429025 477 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 PNKDP1-201ENST00000435914 430 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 AL138787.1-202ENST00000437804 898 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 DNAJB5P1-201ENST00000454004 806 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 AL356981.1-201ENST00000454879 684 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC009963.3-201ENST00000458090 486 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC092754.1-201ENST00000472975 479 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 RPS3AP15-201ENST00000483874 781 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 DEFB109F-201ENST00000491870 277 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC106822.1-201ENST00000502647 526 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AGGF1P9-201ENST00000561884 913 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC124916.2-201ENST00000604416 224 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC067838.1-201ENST00000606064 577 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 AP005431.1-201ENST00000618479 319 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 AC007204.1-201ENST00000621794 555 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 CUL4AP1-201ENST00000514750 1863 ntBASIC4.53□□□□□ -1.68
HLA-DMAP28067 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMAP28067 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.53□□□□□ -1.69
HLA-DMAP28067 NEPNP-201ENST00000404786 1371 ntBASIC4.53□□□□□ -1.69
HLA-DMAP28067 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 MAPK10-320ENST00000641462 6696 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 LINC01355-201ENST00000566551 5444 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 TMSB4XP2-201ENST00000335179 210 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 RN7SKP104-201ENST00000362605 328 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 DBIP1-201ENST00000401435 260 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 RPS3AP2-201ENST00000407190 754 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 SEPT7P8-201ENST00000413308 775 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC004690.1-201ENST00000418216 328 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 GAPDHP58-201ENST00000438477 1006 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 MTND4LP12-201ENST00000448237 295 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms