Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC007066.1-201ENST00000392902 381 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AC008171.1-201ENST00000395058 200 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.08□□□□□ -1.28
NFKB1P19838 AP000357.1-201ENST00000409926 1165 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.08□□□□□ -1.28
NFKB1P19838 HMGB3P23-201ENST00000414981 585 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 BTF3L4P3-201ENST00000418879 476 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.08□□□□□ -1.28
NFKB1P19838 AL359633.1-201ENST00000421403 310 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 GRPEL2P2-201ENST00000421856 670 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.08□□□□□ -1.28
NFKB1P19838 DUTP4-201ENST00000424782 475 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.08□□□□□ -1.28
NFKB1P19838 RPL31P54-201ENST00000429803 370 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 FMO7P-201ENST00000436045 768 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.08□□□□□ -1.28
NFKB1P19838 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.08□□□□□ -1.28
NFKB1P19838 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.08□□□□□ -1.28
NFKB1P19838 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 OR7E125P-201ENST00000443450 846 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.08□□□□□ -1.28
NFKB1P19838 CBX5P1-201ENST00000468470 561 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 AC104108.1-201ENST00000509930 412 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 AC106800.2-201ENST00000514009 1103 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 CYP4F27P-201ENST00000514557 494 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 Y_RNA.701-201ENST00000516812 110 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 SCARNA18.2-201ENST00000516882 84 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 IGLVV-66-201ENST00000523818 341 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.08□□□□□ -1.28
NFKB1P19838 NF1P12-201ENST00000549593 583 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 FXNP1-201ENST00000555153 337 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.08□□□□□ -1.28
NFKB1P19838 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.08□□□□□ -1.28
NFKB1P19838 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 AC060780.3-201ENST00000589464 80 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 NDUFB9P1-201ENST00000604683 510 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AP000942.4-201ENST00000604811 241 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AC131902.3-201ENST00000611767 581 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 AC018558.4-201ENST00000622153 281 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AC006328.2-201ENST00000623198 397 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AC007342.8-201ENST00000623278 678 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 AC012005.2-201ENST00000624333 397 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 VPS8-228ENST00000628962 207 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 AC026108.1-201ENST00000635444 547 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 AC129502.1-201ENST00000623261 1654 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
NFKB1P19838 AL133243.4-201ENST00000623116 3109 ntBASIC7.08□□□□□ -1.28
NFKB1P19838 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NFKB1P19838 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.08□□□□□ -1.28
NFKB1P19838 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.08□□□□□ -1.28
NFKB1P19838 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NFKB1P19838 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NFKB1P19838 LYARP1-201ENST00000436977 1501 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 AC005839.1-201ENST00000624148 3213 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NFKB1P19838 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NFKB1P19838 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.07□□□□□ -1.28
NFKB1P19838 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NFKB1P19838 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 TATDN2P3-201ENST00000452855 3665 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
NFKB1P19838 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 RN7SKP47-201ENST00000365347 328 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 Y_RNA.402-201ENST00000383972 102 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.07□□□□□ -1.28
NFKB1P19838 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NFKB1P19838 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 AC092647.1-201ENST00000420654 287 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.07□□□□□ -1.28
NFKB1P19838 AC007742.1-201ENST00000425789 329 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 ELOCP26-201ENST00000436067 329 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 AL022238.1-201ENST00000442557 355 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.07□□□□□ -1.28
NFKB1P19838 PDSS1P2-201ENST00000449397 678 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 AC114755.1-201ENST00000453101 868 ntBASIC7.07□□□□□ -1.28
NFKB1P19838 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms