Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.74□□□□□ -1.01
TOP2AP11388 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC8.74□□□□□ -1.01
TOP2AP11388 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.74□□□□□ -1.01
TOP2AP11388 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.74□□□□□ -1.01
TOP2AP11388 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC8.74□□□□□ -1.01
TOP2AP11388 ERVFRD-3-201ENST00000578561 1617 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.74□□□□□ -1.01
TOP2AP11388 SNORA70.10-201ENST00000384515 134 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 LRRC37BP1-201ENST00000398851 714 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 AC012512.1-201ENST00000446594 718 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC8.74□□□□□ -1.01
TOP2AP11388 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.74□□□□□ -1.01
TOP2AP11388 HMGB1P4-201ENST00000455362 567 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC8.74□□□□□ -1.01
TOP2AP11388 ASB8-204ENST00000536071 568 ntTSL 4 BASIC8.74□□□□□ -1.01
TOP2AP11388 TVP23CP2-201ENST00000571473 623 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.74□□□□□ -1.01
TOP2AP11388 AC009704.2-201ENST00000618739 483 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 AC087821.1-201ENST00000623639 567 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TOP2AP11388 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
TOP2AP11388 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 AL137100.1-201ENST00000556703 1620 ntBASIC8.73□□□□□ -1.01
TOP2AP11388 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.73□□□□□ -1.01
TOP2AP11388 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
TOP2AP11388 OR4K15-201ENST00000305051 1216 ntBASIC8.73□□□□□ -1.01
TOP2AP11388 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC8.73□□□□□ -1.01
TOP2AP11388 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC8.73□□□□□ -1.01
TOP2AP11388 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.73□□□□□ -1.01
TOP2AP11388 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
TOP2AP11388 RPL26P30-202ENST00000602923 645 ntBASIC8.73□□□□□ -1.01
TOP2AP11388 AC019206.1-201ENST00000621938 425 ntBASIC8.73□□□□□ -1.01
TOP2AP11388 AC021106.3-201ENST00000623925 531 ntBASIC8.73□□□□□ -1.01
TOP2AP11388 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TOP2AP11388 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
TOP2AP11388 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOP2AP11388 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
TOP2AP11388 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 TBCAP2-201ENST00000416175 326 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.72□□□□□ -1.01
TOP2AP11388 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.72□□□□□ -1.01
TOP2AP11388 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.72□□□□□ -1.01
TOP2AP11388 AC010326.1-201ENST00000462726 602 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.72□□□□□ -1.01
TOP2AP11388 AC009643.1-201ENST00000532030 391 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.72□□□□□ -1.01
TOP2AP11388 RN7SL802P-201ENST00000577858 299 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 AP005119.2-201ENST00000579735 1105 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.72□□□□□ -1.01
TOP2AP11388 AC025857.2-201ENST00000602711 238 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 AC007786.3-201ENST00000615154 596 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 AL022401.1-201ENST00000619498 108 ntBASIC8.72□□□□□ -1.01
TOP2AP11388 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TOP2AP11388 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
TOP2AP11388 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.71□□□□□ -1.01
TOP2AP11388 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TOP2AP11388 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TOP2AP11388 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
TOP2AP11388 MTND4LP17-201ENST00000414607 293 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 AL158827.1-201ENST00000416300 391 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 H3F3BP1-201ENST00000440551 403 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 AC023271.1-201ENST00000445936 1090 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 AL161747.1-201ENST00000480068 358 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 RN7SKP21-201ENST00000516503 220 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 MTCYBP13-201ENST00000578634 1093 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.71□□□□□ -1.01
TOP2AP11388 AC000095.2-202ENST00000637415 154 ntBASIC8.71□□□□□ -1.01
TOP2AP11388 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TOP2AP11388 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TOP2AP11388 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms