Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.19□□□□□ -1.26
RARAP10276 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RARAP10276 SEC63P2-201ENST00000503863 1939 ntBASIC7.19□□□□□ -1.26
RARAP10276 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RARAP10276 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
RARAP10276 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.19□□□□□ -1.26
RARAP10276 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
RARAP10276 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.18□□□□□ -1.26
RARAP10276 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 Z83820.1-201ENST00000456978 1499 ntBASIC7.18□□□□□ -1.26
RARAP10276 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 AL359263.1-201ENST00000441188 2796 ntBASIC7.18□□□□□ -1.26
RARAP10276 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.18□□□□□ -1.26
RARAP10276 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RARAP10276 CBX3P1-201ENST00000325243 554 ntBASIC7.18□□□□□ -1.26
RARAP10276 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 Y_RNA.450-201ENST00000384198 113 ntBASIC7.18□□□□□ -1.26
RARAP10276 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RARAP10276 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 SOD1P1-201ENST00000407803 440 ntBASIC7.18□□□□□ -1.26
RARAP10276 SNORA11D-201ENST00000408548 128 ntBASIC7.18□□□□□ -1.26
RARAP10276 SNORA11E-201ENST00000408778 128 ntBASIC7.18□□□□□ -1.26
RARAP10276 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RARAP10276 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.18□□□□□ -1.26
RARAP10276 RPSAP60-201ENST00000415403 880 ntBASIC7.18□□□□□ -1.26
RARAP10276 GRPEL2P2-201ENST00000421856 670 ntBASIC7.18□□□□□ -1.26
RARAP10276 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 AC006065.1-201ENST00000422539 802 ntBASIC7.18□□□□□ -1.26
RARAP10276 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.18□□□□□ -1.26
RARAP10276 GAPDHP69-201ENST00000425504 1008 ntBASIC7.18□□□□□ -1.26
RARAP10276 FAM96AP1-201ENST00000430879 482 ntBASIC7.18□□□□□ -1.26
RARAP10276 BTF3P10-201ENST00000433415 495 ntBASIC7.18□□□□□ -1.26
RARAP10276 AL512286.1-201ENST00000439244 400 ntBASIC7.18□□□□□ -1.26
RARAP10276 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.18□□□□□ -1.26
RARAP10276 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 PNPLA4P1-201ENST00000458328 305 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC079841.1-201ENST00000481228 950 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC063943.2-201ENST00000495697 534 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC091951.2-201ENST00000500762 203 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 HMGB1P44-201ENST00000508597 572 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 RNU6-875P-201ENST00000516488 106 ntBASIC7.18□□□□□ -1.26
RARAP10276 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 SSU72P6-201ENST00000532644 488 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC092375.1-201ENST00000550410 637 ntBASIC7.18□□□□□ -1.26
RARAP10276 UBE2FP2-201ENST00000566646 462 ntBASIC7.18□□□□□ -1.26
RARAP10276 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.18□□□□□ -1.26
RARAP10276 MIR548AB-201ENST00000584917 84 ntBASIC7.18□□□□□ -1.26
RARAP10276 AL031429.2-201ENST00000602605 649 ntBASIC7.18□□□□□ -1.26
RARAP10276 BNIP3P9-201ENST00000603714 553 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC073862.4-201ENST00000622982 854 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC007347.2-201ENST00000623044 180 ntBASIC7.18□□□□□ -1.26
RARAP10276 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.18□□□□□ -1.26
RARAP10276 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
RARAP10276 AL354702.2-202ENST00000641481 890 ntBASIC7.18□□□□□ -1.26
RARAP10276 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RARAP10276 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 OR52B5P-204ENST00000641744 3467 ntBASIC7.18□□□□□ -1.26
RARAP10276 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.18□□□□□ -1.26
RARAP10276 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.18□□□□□ -1.26
RARAP10276 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RARAP10276 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RARAP10276 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.17□□□□□ -1.26
RARAP10276 AC102941.1-201ENST00000567616 1537 ntBASIC7.17□□□□□ -1.26
RARAP10276 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RARAP10276 ATP5BP1-201ENST00000411980 1574 ntBASIC7.17□□□□□ -1.26
RARAP10276 AC017104.4-201ENST00000636283 1592 ntBASIC7.17□□□□□ -1.26
RARAP10276 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.17□□□□□ -1.26
RARAP10276 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RARAP10276 RNU12-2P-201ENST00000364789 156 ntBASIC7.17□□□□□ -1.26
RARAP10276 Y_RNA.302-201ENST00000364997 102 ntBASIC7.17□□□□□ -1.26
RARAP10276 SNORD65.1-201ENST00000390889 71 ntBASIC7.17□□□□□ -1.26
RARAP10276 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.17□□□□□ -1.26
RARAP10276 AC007068.1-201ENST00000396690 844 ntBASIC7.17□□□□□ -1.26
RARAP10276 CYCSP45-201ENST00000402289 315 ntBASIC7.17□□□□□ -1.26
RARAP10276 RNA5SP280-201ENST00000411230 115 ntBASIC7.17□□□□□ -1.26
RARAP10276 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC7.17□□□□□ -1.26
RARAP10276 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms