Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC125494.2-201ENST00000602431 657 ntBASIC6.93□□□□□ -1.3
THBS1P07996 AL391646.1-201ENST00000603860 190 ntBASIC6.93□□□□□ -1.3
THBS1P07996 AL590560.2-201ENST00000608430 732 ntBASIC6.93□□□□□ -1.3
THBS1P07996 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
THBS1P07996 RPL36AP21-202ENST00000639134 430 ntBASIC6.93□□□□□ -1.3
THBS1P07996 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.93□□□□□ -1.3
THBS1P07996 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
THBS1P07996 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
THBS1P07996 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.93□□□□□ -1.3
THBS1P07996 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
THBS1P07996 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
THBS1P07996 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
THBS1P07996 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
THBS1P07996 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.92□□□□□ -1.3
THBS1P07996 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 NF1P8-201ENST00000415351 1461 ntBASIC6.92□□□□□ -1.3
THBS1P07996 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.92□□□□□ -1.3
THBS1P07996 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.92□□□□□ -1.3
THBS1P07996 OR4A15-201ENST00000314706 1035 ntBASIC6.92□□□□□ -1.3
THBS1P07996 RNU6-533P-201ENST00000384144 107 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 RN7SKP89-201ENST00000410774 242 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.92□□□□□ -1.3
THBS1P07996 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 RPL5P34-201ENST00000426545 891 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AL445669.1-201ENST00000426743 755 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC130472.1-201ENST00000427885 309 ntBASIC6.92□□□□□ -1.3
THBS1P07996 RPL7P54-201ENST00000438336 674 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 SS18L2P1-201ENST00000445923 213 ntBASIC6.92□□□□□ -1.3
THBS1P07996 HMGN1P36-201ENST00000446623 298 ntBASIC6.92□□□□□ -1.3
THBS1P07996 COX6CP18-201ENST00000448769 222 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 RPS4XP19-201ENST00000460237 736 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC112206.1-201ENST00000468416 477 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.92□□□□□ -1.3
THBS1P07996 SSX8-201ENST00000506270 579 ntBASIC6.92□□□□□ -1.3
THBS1P07996 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.92□□□□□ -1.3
THBS1P07996 RPL7L1P13-201ENST00000511702 739 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 RNU7-30P-201ENST00000516835 62 ntBASIC6.92□□□□□ -1.3
THBS1P07996 SNX18P27-201ENST00000523611 779 ntBASIC6.92□□□□□ -1.3
THBS1P07996 OR7E87P-201ENST00000532397 929 ntBASIC6.92□□□□□ -1.3
THBS1P07996 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 BMS1P15-201ENST00000554269 1141 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 AC110588.1-201ENST00000559699 137 ntBASIC6.92□□□□□ -1.3
THBS1P07996 MIR4642-201ENST00000583943 82 ntBASIC6.92□□□□□ -1.3
THBS1P07996 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.92□□□□□ -1.3
THBS1P07996 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.92□□□□□ -1.3
THBS1P07996 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 AL137190.1-201ENST00000603288 282 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC011816.2-201ENST00000607089 556 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.92□□□□□ -1.3
THBS1P07996 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 AC068234.2-201ENST00000619646 522 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC009248.2-201ENST00000619826 254 ntBASIC6.92□□□□□ -1.3
THBS1P07996 RN7SL680P-201ENST00000620379 299 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.92□□□□□ -1.3
THBS1P07996 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.92□□□□□ -1.3
THBS1P07996 AC015908.5-201ENST00000623289 343 ntBASIC6.92□□□□□ -1.3
THBS1P07996 MKKS-204ENST00000639674 192 ntBASIC6.92□□□□□ -1.3
THBS1P07996 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
THBS1P07996 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.92□□□□□ -1.3
THBS1P07996 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
THBS1P07996 AC007998.4-201ENST00000612496 2533 ntBASIC6.92□□□□□ -1.3
THBS1P07996 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 AC074198.1-201ENST00000506546 1397 ntBASIC6.92□□□□□ -1.3
THBS1P07996 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.92□□□□□ -1.3
THBS1P07996 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
THBS1P07996 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.92□□□□□ -1.3
THBS1P07996 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.92□□□□□ -1.3
THBS1P07996 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
THBS1P07996 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
THBS1P07996 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 AC009166.2-201ENST00000624410 2833 ntBASIC6.91□□□□□ -1.3
THBS1P07996 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.91□□□□□ -1.3
THBS1P07996 CKAP2P1-201ENST00000555477 2049 ntBASIC6.91□□□□□ -1.3
THBS1P07996 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
THBS1P07996 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
THBS1P07996 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms