Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC013442.1-201ENST00000397347 228 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 RN7SKP97-201ENST00000410966 333 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 GNG5P5-201ENST00000420444 220 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 NAP1L4P2-201ENST00000425958 899 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 NOP56P2-201ENST00000447491 769 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC023141.9-201ENST00000458734 412 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 RPSAP39-201ENST00000467439 883 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 RN7SL51P-201ENST00000468230 285 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 RN7SL466P-201ENST00000497546 295 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 RNA5SP303-201ENST00000516192 130 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AP005262.1-201ENST00000582646 997 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 TAS2R6P-201ENST00000605022 826 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC022106.2-201ENST00000620114 757 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC015871.5-202ENST00000623252 701 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AP000550.3-201ENST00000637734 379 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC132825.8-201ENST00000640783 297 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 AC027279.1-201ENST00000568885 4284 ntBASIC4.67□□□□□ -1.66
HLA-DPB1P04440 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 MIR323A-201ENST00000362199 86 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 RNA5SP319-201ENST00000362768 119 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 RN7SKP124-201ENST00000364730 341 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 UBBP2-201ENST00000376781 231 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC013429.2-201ENST00000418798 781 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 RPL36AP10-201ENST00000421785 322 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC013410.1-201ENST00000436223 1232 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AL391987.1-201ENST00000441025 200 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 RPS27AP2-201ENST00000457576 465 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 RN7SL189P-201ENST00000468631 289 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 RPL35AP19-201ENST00000469425 329 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC073073.1-201ENST00000493920 463 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 IGKV3D-34-201ENST00000522638 302 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 EIF4EP5-201ENST00000528228 640 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC078878.1-201ENST00000539832 958 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC015720.2-201ENST00000567709 334 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AL162431.4-201ENST00000604674 411 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 AC009950.2-201ENST00000636548 183 ntBASIC4.66□□□□□ -1.66
HLA-DPB1P04440 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPB1P04440 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
HLA-DPB1P04440 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DPB1P04440 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
HLA-DPB1P04440 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DPB1P04440 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.66
HLA-DPB1P04440 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 RNA5SP234-201ENST00000363916 119 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 RN7SKP125-201ENST00000410481 302 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 SETP15-201ENST00000412724 337 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms