Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC011477.5-201ENST00000586571 259 ntBASIC3.07□□□□□ -1.92
APOBP04114 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC3.07□□□□□ -1.92
APOBP04114 AC114781.5-201ENST00000615297 108 ntBASIC3.07□□□□□ -1.92
APOBP04114 AL049536.1-201ENST00000625043 744 ntBASIC3.07□□□□□ -1.92
APOBP04114 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
APOBP04114 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
APOBP04114 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 AL607077.1-201ENST00000401718 499 ntBASIC3.06□□□□□ -1.92
APOBP04114 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 AC090804.1-201ENST00000448870 490 ntBASIC3.06□□□□□ -1.92
APOBP04114 RPS24P16-201ENST00000497294 392 ntBASIC3.06□□□□□ -1.92
APOBP04114 AK3P4-201ENST00000504283 583 ntBASIC3.06□□□□□ -1.92
APOBP04114 MRPL49P2-201ENST00000521066 465 ntBASIC3.06□□□□□ -1.92
APOBP04114 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBP04114 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 AL049794.2-201ENST00000616301 365 ntBASIC3.06□□□□□ -1.92
APOBP04114 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 AL117378.2-201ENST00000622916 1337 ntBASIC3.06□□□□□ -1.92
APOBP04114 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
APOBP04114 STX3-208ENST00000641815 3236 ntBASIC3.06□□□□□ -1.92
APOBP04114 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 AC079298.1-201ENST00000625026 1619 ntBASIC3.06□□□□□ -1.92
APOBP04114 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 AL590240.1-201ENST00000334118 313 ntBASIC3.06□□□□□ -1.92
APOBP04114 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBP04114 AL021331.1-201ENST00000402817 582 ntBASIC3.06□□□□□ -1.92
APOBP04114 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBP04114 AC092651.1-201ENST00000426110 312 ntBASIC3.06□□□□□ -1.92
APOBP04114 BX323845.1-201ENST00000432417 179 ntBASIC3.06□□□□□ -1.92
APOBP04114 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBP04114 ENPP7P9-201ENST00000514456 627 ntBASIC3.06□□□□□ -1.92
APOBP04114 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBP04114 RN7SL802P-201ENST00000577858 299 ntBASIC3.06□□□□□ -1.92
APOBP04114 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBP04114 AC074101.1-201ENST00000637861 241 ntBASIC3.06□□□□□ -1.92
APOBP04114 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBP04114 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBP04114 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 RPL19P16-201ENST00000433839 588 ntBASIC3.06□□□□□ -1.92
APOBP04114 MTND2P28-201ENST00000457540 1044 ntBASIC3.06□□□□□ -1.92
APOBP04114 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBP04114 AC099676.1-201ENST00000608886 657 ntBASIC3.06□□□□□ -1.92
APOBP04114 UGT2B26P-201ENST00000508672 1613 ntBASIC3.06□□□□□ -1.92
APOBP04114 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBP04114 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBP04114 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBP04114 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBP04114 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBP04114 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 RPL23AP26-201ENST00000412728 464 ntBASIC3.05□□□□□ -1.92
APOBP04114 RN7SL189P-201ENST00000468631 289 ntBASIC3.05□□□□□ -1.92
APOBP04114 OR8R1P-201ENST00000543943 764 ntBASIC3.05□□□□□ -1.92
APOBP04114 AC022726.1-201ENST00000587475 207 ntBASIC3.05□□□□□ -1.92
APOBP04114 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 AC090948.2-201ENST00000607363 564 ntBASIC3.05□□□□□ -1.92
APOBP04114 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms