Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 RNU1-94P-201ENST00000362627 173 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 GSTM5P1-201ENST00000434751 660 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC073587.1-201ENST00000447093 876 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AL645937.3-201ENST00000453647 936 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC005008.1-201ENST00000456151 612 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 RN7SL817P-201ENST00000480777 288 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 RN7SKP183-201ENST00000517169 324 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC005341.1-201ENST00000571086 708 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AP001496.3-201ENST00000580230 913 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC005252.1-201ENST00000604518 1063 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AL118522.2-201ENST00000616045 615 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC140113.4-201ENST00000622087 222 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC073592.6-201ENST00000624271 415 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 CASC19-204ENST00000641001 2055 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC116158.1-201ENST00000560231 2129 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.45□□□□□ -1.7
HLA-DQB1P01920 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC066692.1-201ENST00000421721 457 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC004448.2-201ENST00000422360 586 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 SRSF1P1-201ENST00000424058 520 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 COX6CP13-201ENST00000428703 226 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL161722.2-201ENST00000434731 981 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC110602.1-201ENST00000437414 318 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 RPS26P2-201ENST00000440331 348 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 Z80107.2-201ENST00000445127 392 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 LDHBP2-201ENST00000456969 1005 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 EIF2S2P5-201ENST00000457635 968 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL117692.1-201ENST00000494283 713 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL671862.1-201ENST00000515851 349 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 RNA5SP271-201ENST00000516700 88 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 SNORA43.3-201ENST00000517240 103 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC011853.1-201ENST00000518911 454 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 TRIM77BP-201ENST00000524985 1119 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC022882.1-201ENST00000532142 501 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 RPL21P7-201ENST00000557463 483 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC118658.2-201ENST00000618697 459 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 FO681491.1-202ENST00000623392 737 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 AC114786.1-201ENST00000512892 1415 ntBASIC4.44□□□□□ -1.7
HLA-DQB1P01920 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB1P01920 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms