Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 Z80107.2-201ENST00000445127 392 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 HMGN1P2-201ENST00000445197 310 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 AC073587.1-201ENST00000447093 876 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.21□□□□□ -1.58
SHOX2O60902 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 RPL7AP28-201ENST00000464513 571 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 AC104339.1-201ENST00000465478 348 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 RN7SL177P-201ENST00000476596 299 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 PRMT5P1-201ENST00000514351 598 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.21□□□□□ -1.58
SHOX2O60902 AC024940.3-201ENST00000538551 316 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.21□□□□□ -1.58
SHOX2O60902 AC008814.1-201ENST00000603797 406 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 AC245014.3-201ENST00000618589 347 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 AC000123.3-201ENST00000624029 4975 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 CASC19-206ENST00000641028 1430 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 BTBD10P1-201ENST00000549824 1352 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AC116158.1-201ENST00000560231 2129 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SHOX2O60902 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 RNU1-74P-201ENST00000384108 171 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 SNORA66-201ENST00000384792 133 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SHOX2O60902 AL139039.2-201ENST00000407436 479 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 BMS1P13-201ENST00000417301 885 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.2□□□□□ -1.58
SHOX2O60902 BX284632.2-201ENST00000421091 399 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.2□□□□□ -1.58
SHOX2O60902 OR6D1P-201ENST00000436165 939 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.2□□□□□ -1.58
SHOX2O60902 AL512605.1-202ENST00000441919 381 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AL359955.2-201ENST00000445380 353 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.2□□□□□ -1.58
SHOX2O60902 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.2□□□□□ -1.58
SHOX2O60902 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 NDUFA5P5-201ENST00000468361 342 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 RN7SL189P-201ENST00000468631 289 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AL122020.1-201ENST00000472287 459 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SHOX2O60902 MTND6P2-201ENST00000512226 524 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.2□□□□□ -1.58
SHOX2O60902 AC006427.1-201ENST00000514359 712 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 RNU6-964P-201ENST00000516524 69 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 RNA5SP360-201ENST00000516555 118 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.2□□□□□ -1.58
SHOX2O60902 AP003396.4-201ENST00000527574 265 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AC022882.1-201ENST00000532142 501 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SHOX2O60902 GLRXP2-201ENST00000555594 321 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AC090236.2-201ENST00000587933 1101 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AC107993.1-201ENST00000591343 684 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.2□□□□□ -1.58
SHOX2O60902 AC140113.4-201ENST00000622087 222 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 AC005086.4-201ENST00000623065 213 ntBASIC5.2□□□□□ -1.58
SHOX2O60902 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.2□□□□□ -1.58
SHOX2O60902 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHOX2O60902 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHOX2O60902 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHOX2O60902 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHOX2O60902 LYARP1-201ENST00000436977 1501 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.19□□□□□ -1.58
SHOX2O60902 LINC01109-201ENST00000603837 3081 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHOX2O60902 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC008549.2-201ENST00000333482 706 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
SHOX2O60902 RN7SKP240-201ENST00000410583 375 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms