Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZIC3O60481 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.08□□□□□ -1.6
ZIC3O60481 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.08□□□□□ -1.6
ZIC3O60481 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZIC3O60481 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.08□□□□□ -1.6
ZIC3O60481 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
ZIC3O60481 RN7SKP253-201ENST00000516424 309 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.08□□□□□ -1.6
ZIC3O60481 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.08□□□□□ -1.6
ZIC3O60481 AC084759.1-201ENST00000561168 290 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 MRPS21P7-201ENST00000566937 238 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 RBM22P12-201ENST00000567098 1255 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 AC021483.2-201ENST00000567415 758 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 AC090666.1-201ENST00000578241 445 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 CBX3P2-202ENST00000583365 535 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 MIR4420-201ENST00000583944 77 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 EIF1P5-201ENST00000585002 234 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.08□□□□□ -1.6
ZIC3O60481 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 AC025574.2-201ENST00000615621 514 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 AC073342.3-201ENST00000624211 193 ntBASIC5.08□□□□□ -1.6
ZIC3O60481 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.08□□□□□ -1.6
ZIC3O60481 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZIC3O60481 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZIC3O60481 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ZIC3O60481 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.08□□□□□ -1.6
ZIC3O60481 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.08□□□□□ -1.6
ZIC3O60481 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZIC3O60481 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ZIC3O60481 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ZIC3O60481 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.07□□□□□ -1.6
ZIC3O60481 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 RNA5SP326-201ENST00000363209 110 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 RNU6-252P-201ENST00000363232 107 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 RN7SKP124-201ENST00000364730 341 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AC005042.1-201ENST00000393397 800 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL009179.1-201ENST00000406085 265 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 RNU6-584P-201ENST00000410350 95 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 RPL26P37-201ENST00000411983 438 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 TATDN1P1-201ENST00000414123 891 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 OR13Z1P-201ENST00000416141 834 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 MTCO2P17-201ENST00000424336 677 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AC021876.1-201ENST00000425959 359 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL590399.2-201ENST00000427536 309 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL160175.1-201ENST00000428124 247 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC242426.1-201ENST00000435270 960 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AC012075.1-201ENST00000436549 580 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL390119.1-201ENST00000440329 312 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AC019185.1-201ENST00000442718 389 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL353898.1-201ENST00000444055 238 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 CYCSP20-201ENST00000473154 315 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AC093719.1-201ENST00000480427 441 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AL136038.1-201ENST00000497246 351 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 PPM1AP1-201ENST00000502740 1135 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 ST13P12-201ENST00000508958 1094 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 HAUS1P3-201ENST00000523909 662 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC093875.1-201ENST00000623688 504 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 AC092159.4-201ENST00000624944 550 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 AL355480.1-201ENST00000629041 99 ntBASIC5.07□□□□□ -1.6
ZIC3O60481 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.07□□□□□ -1.6
ZIC3O60481 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.07□□□□□ -1.6
ZIC3O60481 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZIC3O60481 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ZIC3O60481 AC007382.1-201ENST00000624376 2618 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms